Detailed information NTG0164077

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: AU077_RS09230
• Genome accession: NZ_CP013688
• Coordinates: 1850908..1851201 (-)
• Length: 97 a.a.
• NCBI ID: WP_039670352.1
• Uniprot ID: A0A380K2F0
• Organism: Streptococcus gallolyticus strain ICDDRB-NRC-S1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1845908..1856201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AU077_RS09185 (AU077_09185)	-	1846212..1846664 (-)	453	WP_058621960.1	hypothetical protein	-
AU077_RS09190 (AU077_09190)	-	1846677..1846886 (-)	210	WP_014293772.1	hypothetical protein	-
AU077_RS09195 (AU077_09195)	-	1846896..1847096 (-)	201	WP_012961332.1	helix-turn-helix transcriptional regulator	-
AU077_RS09200 (AU077_09200)	-	1847258..1848457 (-)	1200	WP_014293771.1	acetate kinase	-
AU077_RS09205 (AU077_09205)	comYH	1848510..1849466 (-)	957	WP_014293770.1	class I SAM-dependent methyltransferase	Machinery gene
AU077_RS09210 (AU077_09210)	comYG	1849548..1849853 (-)	306	WP_058621961.1	competence type IV pilus minor pilin ComGG	Machinery gene
AU077_RS09215 (AU077_09215)	comYF	1849825..1850292 (-)	468	WP_014293768.1	competence type IV pilus minor pilin ComGF	Machinery gene
AU077_RS09220 (AU077_09220)	comGE	1850246..1850539 (-)	294	WP_044562943.1	competence type IV pilus minor pilin ComGE	-
AU077_RS09225 (AU077_09225)	comYD	1850493..1850924 (-)	432	WP_014293766.1	competence type IV pilus minor pilin ComGD	Machinery gene
AU077_RS09230 (AU077_09230)	comYC	1850908..1851201 (-)	294	WP_039670352.1	competence type IV pilus major pilin ComGC	Machinery gene
AU077_RS09235 (AU077_09235)	comYB	1851201..1852286 (-)	1086	WP_014293764.1	competence type IV pilus assembly protein ComGB	Machinery gene
AU077_RS09240 (AU077_09240)	comYA	1852168..1853109 (-)	942	WP_014293763.1	competence type IV pilus ATPase ComGA	Machinery gene
AU077_RS09245 (AU077_09245)	-	1853219..1853548 (-)	330	WP_014293762.1	DUF1033 family protein	-

Sequence

Protein

• Length: 97 a.a.
• Molecular weight: 11108.25 Da
• Isoelectric Point: 9.9310

>NTDB_id=164077 AU077_RS09230 WP_039670352.1 1850908..1851201(-) (comYC) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MKKFWKKLRQKTVKGFTLVEMLIVLLIISVLMLLFVPNLSKQKDVVREKGDAAVVKVVESQMDLYEMKTGDKPTVDDLVE
VGYITSEQAKTYNEAKK

Nucleotide

• Length: 294 bp

>NTDB_id=164077 AU077_RS09230 WP_039670352.1 1850908..1851201(-) (comYC) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGAAAAAGTTTTGGAAAAAATTACGTCAGAAAACGGTAAAAGGGTTCACACTTGTGGAGATGTTGATTGTGCTTCTTAT
TATCAGTGTTTTAATGTTGCTTTTTGTACCGAATTTGAGTAAGCAAAAGGATGTTGTTCGTGAAAAAGGCGATGCTGCTG
TTGTGAAAGTGGTAGAGAGCCAAATGGATTTGTACGAAATGAAAACGGGAGACAAACCGACTGTTGATGATTTAGTTGAA
GTTGGCTACATCACTTCTGAACAAGCAAAAACTTACAATGAAGCTAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (13-34)

3D structure

• AlphaFold DB: A0A380K2F0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	67.391	94.845	0.639
comYC	Streptococcus gordonii str. Challis substr. CH1	64.773	90.722	0.588
comGC/cglC	Streptococcus mitis SK321	60.638	96.907	0.588
comGC/cglC	Streptococcus pneumoniae D39	59.574	96.907	0.577
comGC/cglC	Streptococcus pneumoniae R6	59.574	96.907	0.577
comGC/cglC	Streptococcus pneumoniae TIGR4	59.574	96.907	0.577
comGC/cglC	Streptococcus pneumoniae Rx1	59.574	96.907	0.577
comGC/cglC	Streptococcus mitis NCTC 12261	59.574	96.907	0.577
comYC	Streptococcus mutans UA140	58.427	91.753	0.536
comYC	Streptococcus mutans UA159	58.427	91.753	0.536
comGC	Lactococcus lactis subsp. cremoris KW2	56.667	92.784	0.526
comGC	Staphylococcus aureus MW2	42.697	91.753	0.392
comGC	Staphylococcus aureus N315	42.697	91.753	0.392