Detailed information NTG1139536

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: DQM67_RS09465
• Genome accession: NZ_LS483383
• Coordinates: 1852574..1852891 (-)
• Length: 105 a.a.
• NCBI ID: WP_005591535.1
• Uniprot ID: A0AAV3EGM8
• Organism: Streptococcus cristatus ATCC 51100 strain NCTC 12479
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1847574..1857891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM67_RS09430 (NCTC12479_01826)	-	1847632..1848522 (+)	891	WP_005591542.1	RluA family pseudouridine synthase	-
DQM67_RS09435 (NCTC12479_01827)	-	1848846..1850039 (-)	1194	WP_005591541.1	acetate kinase	-
DQM67_RS09440 (NCTC12479_01828)	comYH	1850075..1851040 (-)	966	WP_005591540.1	class I SAM-dependent methyltransferase	Machinery gene
DQM67_RS09445 (NCTC12479_01829)	comGG	1851121..1851519 (-)	399	WP_005591539.1	competence type IV pilus minor pilin ComGG	-
DQM67_RS09450 (NCTC12479_01830)	comGF/cglF	1851500..1851937 (-)	438	WP_005591538.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQM67_RS09455 (NCTC12479_01831)	comGE	1851921..1852214 (-)	294	WP_174263560.1	competence type IV pilus minor pilin ComGE	-
DQM67_RS09460 (NCTC12479_01832)	comYD	1852180..1852614 (-)	435	WP_037586086.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQM67_RS09465 (NCTC12479_01833)	comYC	1852574..1852891 (-)	318	WP_005591535.1	competence type IV pilus major pilin ComGC	Machinery gene
DQM67_RS09470 (NCTC12479_01834)	comYB	1852888..1853904 (-)	1017	WP_255209852.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQM67_RS09475 (NCTC12479_01835)	comYA	1853852..1854793 (-)	942	WP_005591533.1	competence type IV pilus ATPase ComGA	Machinery gene
DQM67_RS09480 (NCTC12479_01836)	-	1854879..1855250 (-)	372	WP_005591532.1	DUF1033 family protein	-
DQM67_RS09485 (NCTC12479_01837)	-	1855384..1856652 (-)	1269	WP_005591531.1	CapA family protein	-
DQM67_RS09495 (NCTC12479_01838)	comW	1856896..1857123 (-)	228	WP_005592089.1	sigma(X)-activator ComW	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11518.60 Da
• Isoelectric Point: 10.0495

>NTDB_id=1139536 DQM67_RS09465 WP_005591535.1 1852574..1852891(-) (comYC) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
MKKLKTLKVKAFTLVEMLVVLLIISVLMLLFVPNLTKQKDAVSDTGNAAVVKVVESQAELYELKNVNEKATLGKLVADGR
ITDKQVASYKAYYGKNSSEARTVAD

Nucleotide

• Length: 318 bp

>NTDB_id=1139536 DQM67_RS09465 WP_005591535.1 1852574..1852891(-) (comYC) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
ATGAAAAAATTAAAAACTTTGAAGGTTAAAGCCTTCACTCTGGTGGAAATGTTAGTCGTTCTTTTAATCATTAGCGTCTT
GATGCTCTTGTTTGTCCCGAATTTGACTAAGCAGAAGGATGCTGTTTCAGATACGGGCAATGCGGCCGTAGTCAAGGTCG
TAGAAAGTCAGGCTGAGCTTTATGAATTGAAGAATGTTAATGAAAAAGCCACTCTAGGGAAATTGGTTGCTGATGGTCGG
ATTACCGATAAGCAGGTAGCATCCTATAAGGCCTACTATGGAAAAAACAGCAGTGAAGCTCGTACAGTTGCGGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	80.952	100	0.81
comGC/cglC	Streptococcus pneumoniae Rx1	71.569	97.143	0.695
comGC/cglC	Streptococcus pneumoniae D39	71.569	97.143	0.695
comGC/cglC	Streptococcus pneumoniae R6	71.569	97.143	0.695
comGC/cglC	Streptococcus pneumoniae TIGR4	71.569	97.143	0.695
comGC/cglC	Streptococcus mitis SK321	71.569	97.143	0.695
comGC/cglC	Streptococcus mitis NCTC 12261	71.569	97.143	0.695
comYC	Streptococcus mutans UA140	69.524	100	0.695
comYC	Streptococcus mutans UA159	69.524	100	0.695
comGC	Lactococcus lactis subsp. cremoris KW2	58.654	99.048	0.581
comYC	Streptococcus suis isolate S10	66.292	84.762	0.562
comGC	Staphylococcus aureus MW2	48.718	74.286	0.362
comGC	Staphylococcus aureus N315	48.718	74.286	0.362