Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | DQL35_RS00705 | Genome accession | NZ_LS483325 |
| Coordinates | 122119..122442 (+) | Length | 107 a.a. |
| NCBI ID | WP_111677650.1 | Uniprot ID | A0AAX2LF42 |
| Organism | Streptococcus equi subsp. zooepidemicus strain NCTC7022 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 117119..127442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL35_RS00685 (NCTC7022_00137) | - | 117382..119385 (+) | 2004 | WP_111677647.1 | DUF1430 domain-containing protein | - |
| DQL35_RS00690 (NCTC7022_00138) | - | 119387..120031 (+) | 645 | WP_111677648.1 | ATP-binding cassette domain-containing protein | - |
| DQL35_RS00695 (NCTC7022_00139) | comGA/cglA | 120213..121151 (+) | 939 | WP_111678809.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL35_RS00700 (NCTC7022_00140) | comYB | 121084..122118 (+) | 1035 | WP_228294477.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL35_RS00705 (NCTC7022_00141) | comGC/cglC | 122119..122442 (+) | 324 | WP_111677650.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL35_RS00710 (NCTC7022_00142) | comGD | 122420..122845 (+) | 426 | WP_012514783.1 | competence type IV pilus minor pilin ComGD | - |
| DQL35_RS00715 | comGE | 122802..123092 (+) | 291 | WP_043030351.1 | competence type IV pilus minor pilin ComGE | - |
| DQL35_RS00720 (NCTC7022_00143) | comYF | 123079..123513 (+) | 435 | WP_111677651.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL35_RS00725 (NCTC7022_00144) | comGG | 123491..123853 (+) | 363 | WP_111677652.1 | competence type IV pilus minor pilin ComGG | - |
| DQL35_RS00730 (NCTC7022_00146) | - | 123920..125262 (+) | 1343 | WP_172452916.1 | IS3 family transposase | - |
| DQL35_RS00735 (NCTC7022_00147) | comYH | 125347..126300 (+) | 954 | WP_043029264.1 | class I SAM-dependent methyltransferase | Machinery gene |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12165.15 Da Isoelectric Point: 8.4125
>NTDB_id=1136552 DQL35_RS00705 WP_111677650.1 122119..122442(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MKMRLSTLKDQGVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDRQQKAYQDYYAKHKDEAKKLN
MKMRLSTLKDQGVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDRQQKAYQDYYAKHKDEAKKLN
Nucleotide
Download Length: 324 bp
>NTDB_id=1136552 DQL35_RS00705 WP_111677650.1 122119..122442(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
ATGAAAATGAGATTATCAACCTTAAAAGATCAAGGTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAGCAAAAGGATAAGGTGACAGATACAGGCAACGCTGCAG
TGGTAAAGCTAGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTAAAGCAGCTGCAAGAG
GATGGAAGCATCAGTGACAGGCAACAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA
ATGAAAATGAGATTATCAACCTTAAAAGATCAAGGTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAGCAAAAGGATAAGGTGACAGATACAGGCAACGCTGCAG
TGGTAAAGCTAGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTAAAGCAGCTGCAAGAG
GATGGAAGCATCAGTGACAGGCAACAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis SK321 |
59.813 |
100 |
0.598 |
| comGC/cglC | Streptococcus pneumoniae D39 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus pneumoniae R6 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
61.616 |
92.523 |
0.57 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
60.606 |
92.523 |
0.561 |
| comYC | Streptococcus mutans UA140 |
58.763 |
90.654 |
0.533 |
| comYC | Streptococcus mutans UA159 |
58.763 |
90.654 |
0.533 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
55.789 |
88.785 |
0.495 |
| comYC | Streptococcus suis isolate S10 |
58.75 |
74.766 |
0.439 |
| comGC | Staphylococcus aureus MW2 |
50 |
72.897 |
0.364 |
| comGC | Staphylococcus aureus N315 |
50 |
72.897 |
0.364 |