Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   FGK99_RS08695 Genome accession   NZ_LR594033
Coordinates   1823760..1824245 (-) Length   161 a.a.
NCBI ID   WP_138119764.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC4675     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1818760..1829245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK99_RS08670 (NCTC4675_01757) - 1819190..1819750 (-) 561 WP_014623517.1 TIGR01440 family protein -
  FGK99_RS08675 (NCTC4675_01758) - 1819763..1820236 (-) 474 WP_042671321.1 ECF transporter S component -
  FGK99_RS08680 (NCTC4675_01759) - 1820242..1820991 (-) 750 WP_043026574.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  FGK99_RS08685 (NCTC4675_01760) truA 1820981..1821730 (-) 750 WP_043026576.1 tRNA pseudouridine(38-40) synthase TruA -
  FGK99_RS08690 (NCTC4675_01761) - 1821917..1823281 (+) 1365 WP_043026578.1 aspartate kinase -
  FGK99_RS08695 (NCTC4675_01762) comX/sigX/comX2/sigX2 1823760..1824245 (-) 486 WP_138119764.1 competence protein ComX Regulator

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 19415.45 Da        Isoelectric Point: 8.2702

>NTDB_id=1127205 FGK99_RS08695 WP_138119764.1 1823760..1824245(-) (comX/sigX/comX2/sigX2) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
MTDDLVRLFDKIKPIIMKLRRHYYIQLWELDDWLQEGRLILYRLLVTYPELIEDEEKLYRYFKTKFSSYLKDVLRQQESQ
KRRFHKMAYEEIGSVGHAIPAGGLGVDDYVAYQLIVKEVEERLTESELSQFRALIRGERFEGRRALLRKIGPYFQDFIGE
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=1127205 FGK99_RS08695 WP_138119764.1 1823760..1824245(-) (comX/sigX/comX2/sigX2) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
ATGACTGATGATTTAGTGAGGTTATTTGATAAGATCAAGCCTATTATTATGAAGCTAAGACGGCATTATTATATTCAGCT
GTGGGAGCTAGATGATTGGTTACAGGAGGGGCGGTTGATCTTGTATCGGTTATTGGTCACTTATCCAGAATTGATAGAGG
ATGAGGAGAAGCTGTATCGTTATTTTAAGACCAAGTTTTCCTCTTATTTGAAGGACGTGTTGCGGCAGCAGGAGAGTCAG
AAGCGTCGGTTTCATAAGATGGCTTATGAGGAGATTGGGTCGGTAGGCCATGCGATACCAGCAGGTGGTTTGGGAGTAGA
TGATTATGTGGCTTATCAGTTGATTGTGAAGGAGGTTGAGGAGCGATTGACAGAGAGTGAGCTGTCGCAGTTTCGGGCTT
TGATCAGGGGAGAGCGGTTTGAGGGGAGACGGGCCTTGCTTCGCAAGATAGGACCTTACTTTCAGGACTTTATTGGTGAG
AAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.