Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   FGK99_RS08470 Genome accession   NZ_LR594033
Coordinates   1773816..1774301 (-) Length   161 a.a.
NCBI ID   WP_138119764.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC4675     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1768816..1779301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK99_RS08435 (NCTC4675_01710) - 1769160..1769921 (-) 762 WP_331271722.1 class I SAM-dependent methyltransferase -
  FGK99_RS08440 (NCTC4675_01711) rsfS 1770033..1770386 (-) 354 WP_037579981.1 ribosome silencing factor -
  FGK99_RS08445 (NCTC4675_01712) yqeK 1770388..1770981 (-) 594 WP_138119762.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  FGK99_RS08450 (NCTC4675_01713) - 1770978..1771610 (-) 633 WP_012677395.1 nicotinate-nucleotide adenylyltransferase -
  FGK99_RS08455 (NCTC4675_01714) yhbY 1771694..1772002 (-) 309 WP_012516273.1 ribosome assembly RNA-binding protein YhbY -
  FGK99_RS08460 (NCTC4675_01715) yqeH 1772029..1773147 (-) 1119 WP_043026540.1 ribosome biogenesis GTPase YqeH -
  FGK99_RS08465 (NCTC4675_01716) - 1773147..1773674 (-) 528 WP_012677393.1 YqeG family HAD IIIA-type phosphatase -
  FGK99_RS08470 (NCTC4675_01717) comX/sigX/comX2/sigX2 1773816..1774301 (-) 486 WP_138119764.1 competence protein ComX Regulator

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 19415.45 Da        Isoelectric Point: 8.2702

>NTDB_id=1127198 FGK99_RS08470 WP_138119764.1 1773816..1774301(-) (comX/sigX/comX2/sigX2) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
MTDDLVRLFDKIKPIIMKLRRHYYIQLWELDDWLQEGRLILYRLLVTYPELIEDEEKLYRYFKTKFSSYLKDVLRQQESQ
KRRFHKMAYEEIGSVGHAIPAGGLGVDDYVAYQLIVKEVEERLTESELSQFRALIRGERFEGRRALLRKIGPYFQDFIGE
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=1127198 FGK99_RS08470 WP_138119764.1 1773816..1774301(-) (comX/sigX/comX2/sigX2) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
ATGACTGATGATTTAGTGAGGTTATTTGATAAGATCAAGCCTATTATTATGAAGCTAAGACGGCATTATTATATTCAGCT
GTGGGAGCTAGATGATTGGTTACAGGAGGGGCGGTTGATCTTGTATCGGTTATTGGTCACTTATCCAGAATTGATAGAGG
ATGAGGAGAAGCTGTATCGTTATTTTAAGACCAAGTTTTCCTCTTATTTGAAGGACGTGTTGCGGCAGCAGGAGAGTCAG
AAGCGTCGGTTTCATAAGATGGCTTATGAGGAGATTGGGTCGGTAGGCCATGCGATACCAGCAGGTGGTTTGGGAGTAGA
TGATTATGTGGCTTATCAGTTGATTGTGAAGGAGGTTGAGGAGCGATTGACAGAGAGTGAGCTGTCGCAGTTTCGGGCTT
TGATCAGGGGAGAGCGGTTTGAGGGGAGACGGGCCTTGCTTCGCAAGATAGGACCTTACTTTCAGGACTTTATTGGTGAG
AAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.