Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | EL239_RS05500 | Genome accession | NZ_LR134374 |
| Coordinates | 1265986..1266393 (-) | Length | 135 a.a. |
| NCBI ID | WP_126338719.1 | Uniprot ID | - |
| Organism | Legionella spiritensis strain NCTC12082 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1260986..1271393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL239_RS05490 (NCTC12082_01116) | letS | 1261807..1264563 (+) | 2757 | WP_058482311.1 | two-component system sensor histidine kinase LetS | Regulator |
| EL239_RS05495 (NCTC12082_01117) | - | 1264593..1265828 (+) | 1236 | WP_126338718.1 | 6-phosphofructokinase | - |
| EL239_RS05500 (NCTC12082_01118) | pilA2 | 1265986..1266393 (-) | 408 | WP_126338719.1 | pilin | Machinery gene |
| EL239_RS05505 (NCTC12082_01119) | pilA2 | 1266501..1266911 (-) | 411 | WP_126338720.1 | pilin | Machinery gene |
| EL239_RS05510 (NCTC12082_01120) | - | 1267264..1267581 (+) | 318 | WP_126338721.1 | BolA family protein | - |
| EL239_RS05515 (NCTC12082_01121) | - | 1267574..1268017 (+) | 444 | WP_126338722.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| EL239_RS05520 (NCTC12082_01122) | - | 1268091..1269488 (+) | 1398 | WP_126339973.1 | APC family permease | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14226.55 Da Isoelectric Point: 4.3285
>NTDB_id=1122399 EL239_RS05500 WP_126338719.1 1265986..1266393(-) (pilA2) [Legionella spiritensis strain NCTC12082]
MAIKGFTLIEFMIVVAIIAILVVIAIPFLQTYLIRARVSEGLELADPAKLAVTETAINTNVLPASQAQTGYVSPAATSYV
NSIIIDPGGVITITYTATAGGGTIIFMPTLQGNGDMTWDCSGGTLSDQYRPVNCR
MAIKGFTLIEFMIVVAIIAILVVIAIPFLQTYLIRARVSEGLELADPAKLAVTETAINTNVLPASQAQTGYVSPAATSYV
NSIIIDPGGVITITYTATAGGGTIIFMPTLQGNGDMTWDCSGGTLSDQYRPVNCR
Nucleotide
Download Length: 408 bp
>NTDB_id=1122399 EL239_RS05500 WP_126338719.1 1265986..1266393(-) (pilA2) [Legionella spiritensis strain NCTC12082]
ATGGCCATAAAAGGCTTTACCCTTATAGAATTTATGATAGTCGTTGCAATCATTGCCATCCTGGTTGTTATCGCTATTCC
CTTTTTGCAAACCTATCTGATAAGGGCTCGCGTGAGTGAAGGGCTGGAATTGGCAGACCCCGCCAAACTGGCCGTTACTG
AAACGGCTATCAATACCAACGTATTACCCGCCTCTCAGGCGCAAACCGGCTATGTCAGCCCTGCCGCAACATCCTATGTA
AATTCCATAATCATTGATCCCGGTGGTGTTATAACCATTACCTATACGGCAACGGCCGGTGGTGGCACTATTATCTTCAT
GCCCACGTTACAGGGTAATGGTGATATGACCTGGGATTGTTCCGGTGGTACGTTATCTGATCAGTATCGTCCGGTTAACT
GTCGTTAA
ATGGCCATAAAAGGCTTTACCCTTATAGAATTTATGATAGTCGTTGCAATCATTGCCATCCTGGTTGTTATCGCTATTCC
CTTTTTGCAAACCTATCTGATAAGGGCTCGCGTGAGTGAAGGGCTGGAATTGGCAGACCCCGCCAAACTGGCCGTTACTG
AAACGGCTATCAATACCAACGTATTACCCGCCTCTCAGGCGCAAACCGGCTATGTCAGCCCTGCCGCAACATCCTATGTA
AATTCCATAATCATTGATCCCGGTGGTGTTATAACCATTACCTATACGGCAACGGCCGGTGGTGGCACTATTATCTTCAT
GCCCACGTTACAGGGTAATGGTGATATGACCTGGGATTGTTCCGGTGGTACGTTATCTGATCAGTATCGTCCGGTTAACT
GTCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
71.852 |
100 |
0.719 |
| pilA2 | Legionella pneumophila str. Paris |
71.111 |
100 |
0.711 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.625 |
100 |
0.481 |
| comP | Acinetobacter baylyi ADP1 |
40.789 |
100 |
0.459 |
| pilA/pilA1 | Eikenella corrodens VA1 |
33.758 |
100 |
0.393 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.129 |
100 |
0.393 |
| pilA | Haemophilus influenzae 86-028NP |
40 |
96.296 |
0.385 |
| pilA | Haemophilus influenzae Rd KW20 |
39.535 |
95.556 |
0.378 |
| pilA | Pseudomonas aeruginosa PAK |
33.557 |
100 |
0.37 |
| pilE | Neisseria gonorrhoeae MS11 |
32.258 |
100 |
0.37 |