Detailed information NTG1121291

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: EL136_RS08690
• Genome accession: NZ_LR134317
• Coordinates: 1834842..1835165 (-)
• Length: 107 a.a.
• NCBI ID: WP_014622142.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC6180
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1829842..1840165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL136_RS08660 (NCTC6180_01776)	comYH	1830995..1831948 (-)	954	WP_043024962.1	class I SAM-dependent methyltransferase	Machinery gene
EL136_RS08665 (NCTC6180_01778)	-	1832054..1833396 (+)	1343	WP_165626751.1	IS3 family transposase	-
EL136_RS08670 (NCTC6180_01779)	comGG	1833431..1833793 (-)	363	WP_154804226.1	competence type IV pilus minor pilin ComGG	-
EL136_RS08675 (NCTC6180_01780)	comYF	1833771..1834205 (-)	435	WP_042669824.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL136_RS08680 (NCTC6180_01781)	comGE	1834192..1834482 (-)	291	WP_154804227.1	competence type IV pilus minor pilin ComGE	-
EL136_RS08685 (NCTC6180_01782)	comGD	1834439..1834864 (-)	426	WP_012514783.1	competence type IV pilus minor pilin ComGD	-
EL136_RS08690 (NCTC6180_01783)	comGC/cglC	1834842..1835165 (-)	324	WP_014622142.1	competence type IV pilus major pilin ComGC	Machinery gene
EL136_RS08695 (NCTC6180_01784)	comYB	1835166..1836200 (-)	1035	WP_232013965.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL136_RS08700 (NCTC6180_01785)	comGA/cglA	1836133..1837071 (-)	939	WP_154804229.1	competence type IV pilus ATPase ComGA	Machinery gene
EL136_RS08705 (NCTC6180_01786)	-	1837227..1837895 (-)	669	WP_043024949.1	ATP-binding cassette domain-containing protein	-
EL136_RS08710 (NCTC6180_01787)	-	1837897..1839900 (-)	2004	WP_154804230.1	DUF1430 domain-containing protein	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12093.13 Da
• Isoelectric Point: 9.3196

>NTDB_id=1121291 EL136_RS08690 WP_014622142.1 1834842..1835165(-) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
MKMRLSTLKGQAVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKKLN

Nucleotide

• Length: 324 bp

>NTDB_id=1121291 EL136_RS08690 WP_014622142.1 1834842..1835165(-) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
ATGAAAATGAGATTATCAACCTTAAAAGGTCAAGCTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAACAAAAGGATAAGGTGACAGACACAGGCAATGCTGCGG
TGGTAAAGCTGGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGTATCAGTGACAAGCAGCAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	59.813	100	0.598
comGC/cglC	Streptococcus pneumoniae Rx1	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae D39	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae R6	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae TIGR4	57.944	100	0.579
comYC	Streptococcus gordonii str. Challis substr. CH1	60.396	94.393	0.57
comGC/cglC	Streptococcus mitis NCTC 12261	61.616	92.523	0.57
comYC	Streptococcus mutans UA140	58.763	90.654	0.533
comYC	Streptococcus mutans UA159	58.763	90.654	0.533
comGC	Lactococcus lactis subsp. cremoris KW2	56.842	88.785	0.505
comYC	Streptococcus suis isolate S10	60	74.766	0.449
comGC	Staphylococcus aureus MW2	50	72.897	0.364
comGC	Staphylococcus aureus N315	50	72.897	0.364