Detailed information NTG1119794

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: EL086_RS01070
• Genome accession: NZ_LR134274
• Coordinates: 193556..194053 (+)
• Length: 165 a.a.
• NCBI ID: WP_021143466.1
• Uniprot ID: A0AB33ZG65
• Organism: Streptococcus salivarius strain NCTC8618
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 188556..199053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL086_RS01070 (NCTC8618_02623)	comX/sigX	193556..194053 (+)	498	WP_021143466.1	sigma factor	Regulator
EL086_RS01075 (NCTC8618_02624)	-	194161..195003 (-)	843	WP_037605435.1	mechanosensitive ion channel family protein	-
EL086_RS01080 (NCTC8618_02625)	tig	195146..196429 (+)	1284	WP_002885606.1	trigger factor	-
EL086_RS01085 (NCTC8618_02626)	rpoE	196587..197162 (+)	576	WP_002885605.1	DNA-directed RNA polymerase subunit delta	-
EL086_RS01090 (NCTC8618_02627)	-	197415..199019 (+)	1605	WP_022496517.1	CTP synthase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 20023.81 Da
• Isoelectric Point: 4.9953

>NTDB_id=1119794 EL086_RS01070 WP_021143466.1 193556..194053(+) (comX/sigX) [Streptococcus salivarius strain NCTC8618]
MEQEVFVHAYEVVRPIVLKASRQYFIQLWDQADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKFWMVDFDP
YNEDD

Nucleotide

• Length: 498 bp

>NTDB_id=1119794 EL086_RS01070 WP_021143466.1 193556..194053(+) (comX/sigX) [Streptococcus salivarius strain NCTC8618]
ATGGAACAAGAAGTTTTTGTTCACGCATATGAGGTTGTTAGGCCGATTGTACTTAAGGCTAGTCGACAATATTTCATCCA
ACTTTGGGACCAAGCTGATATGGAGCAAGAAGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGTTACGGCGTTATTTTAAAACGAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGACAAGCCAATAGACAATGTTATATTGAAATTTCAGATATTGCTTTTTGTCTTCCAAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGGAAAAAGATGATTCGAGAGTTAAAATTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus salivarius strain HSISS4	100	100	1
comX	Streptococcus salivarius SK126	99.394	100	0.994
comX	Streptococcus thermophilus LMD-9	89.091	100	0.891
comX	Streptococcus thermophilus LMG 18311	89.091	100	0.891
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	43.226	93.939	0.406
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	43.226	93.939	0.406
comX	Streptococcus sobrinus strain NIDR 6715-7	40.606	100	0.406
comX/sigX	Streptococcus mutans UA159	41.667	94.545	0.394
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.026	94.545	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX	Streptococcus suis D9	39.869	92.727	0.37
comX/sigX	Streptococcus suis isolate S10	39.869	92.727	0.37
comX/sigX	Streptococcus suis P1/7	39.869	92.727	0.37