Detailed information NTG1118986

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: EL020_RS08960
• Genome accession: NZ_LR134203
• Coordinates: 1762437..1762913 (-)
• Length: 158 a.a.
• NCBI ID: WP_081665447.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain NCTC11436
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1757437..1767913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL020_RS08930 (NCTC11436_01905)	-	1757514..1757738 (-)	225	WP_020916227.1	acyl carrier protein	-
EL020_RS08935 (NCTC11436_01906)	-	1757799..1758773 (-)	975	WP_020916226.1	beta-ketoacyl-ACP synthase III	-
EL020_RS08940 (NCTC11436_01907)	-	1758776..1759210 (-)	435	WP_039695988.1	MarR family winged helix-turn-helix transcriptional regulator	-
EL020_RS08945 (NCTC11436_01908)	-	1759326..1760114 (-)	789	WP_058813644.1	enoyl-CoA hydratase	-
EL020_RS08950 (NCTC11436_01909)	-	1760306..1760953 (-)	648	WP_020916224.1	HAD family hydrolase	-
EL020_RS08955 (NCTC11436_01910)	-	1761050..1762408 (+)	1359	WP_126402655.1	aspartate kinase	-
EL020_RS08960 (NCTC11436_01911)	comX/sigX	1762437..1762913 (-)	477	WP_081665447.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 19498.37 Da
• Isoelectric Point: 9.1153

>NTDB_id=1118986 EL020_RS08960 WP_081665447.1 1762437..1762913(-) (comX/sigX) [Streptococcus lutetiensis strain NCTC11436]
MDFERYFQTVKPIILKLRRYYFVKLWDYEDWIQEGRIIFFELVEEHPDLLINEGKRYSYFKTKFSNHVKDIIRHQESFKR
KFNRMPYEEIGDISHCVPQVSFFEVADYVAYQDSLARLRRTLGREDRLKLEKVIRGERFEGKKDFLKSIEPYFSDFRP

Nucleotide

• Length: 477 bp

>NTDB_id=1118986 EL020_RS08960 WP_081665447.1 1762437..1762913(-) (comX/sigX) [Streptococcus lutetiensis strain NCTC11436]
GTGGATTTTGAACGCTATTTTCAAACGGTTAAACCAATTATTTTAAAATTACGTCGTTATTATTTTGTCAAACTCTGGGA
TTATGAGGATTGGATTCAAGAGGGACGTATTATTTTCTTTGAACTTGTAGAGGAACATCCTGATCTCTTAATTAATGAAG
GCAAACGTTATAGCTACTTTAAAACAAAATTTTCTAACCATGTTAAAGATATTATCCGCCATCAGGAATCCTTTAAACGA
AAATTTAATCGTATGCCTTATGAAGAAATTGGTGATATTAGTCACTGTGTACCCCAGGTATCTTTCTTTGAAGTCGCAGA
TTACGTGGCTTATCAGGATAGCTTAGCACGTTTACGAAGAACATTGGGAAGAGAAGATAGACTGAAGTTGGAAAAAGTGA
TTCGTGGGGAACGTTTTGAAGGGAAGAAAGACTTCTTAAAAAGCATTGAACCGTATTTCTCAGATTTTAGACCATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	92.405	100	0.924
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	48.667	94.937	0.462
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	48.667	94.937	0.462
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	48.667	94.937	0.462
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	48.667	94.937	0.462
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	48.667	94.937	0.462
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	48.667	94.937	0.462
comX/sigX	Streptococcus mutans UA159	46.154	98.734	0.456
comX	Streptococcus sobrinus strain NIDR 6715-7	44.156	97.468	0.43
comX	Streptococcus thermophilus LMD-9	39.744	98.734	0.392
comX	Streptococcus thermophilus LMG 18311	39.744	98.734	0.392
comX/sigX	Streptococcus suis D9	38.854	99.367	0.386
comX/sigX	Streptococcus suis isolate S10	38.854	99.367	0.386
comX/sigX	Streptococcus suis P1/7	38.854	99.367	0.386
comX/sigX	Streptococcus salivarius strain HSISS4	38.462	98.734	0.38
comX	Streptococcus salivarius SK126	38.462	98.734	0.38
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	37.975	100	0.38
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	37.975	100	0.38