Detailed information NTG1057786

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACFJY4_RS17230
• Genome accession: NZ_CP170500
• Coordinates: 3655003..3655479 (+)
• Length: 158 a.a.
• NCBI ID: WP_090519242.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain MBI-RS3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3650003..3660479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFJY4_RS17215 (ACFJY4_17210)	pilD	3650897..3651766 (-)	870	WP_017246372.1	A24 family peptidase	Machinery gene
ACFJY4_RS17220 (ACFJY4_17215)	pilC	3651769..3652986 (-)	1218	WP_351157777.1	type II secretion system F family protein	Machinery gene
ACFJY4_RS17225 (ACFJY4_17220)	pilB	3652988..3654691 (-)	1704	WP_386413420.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACFJY4_RS17230 (ACFJY4_17225)	pilA	3655003..3655479 (+)	477	WP_090519242.1	pilin	Machinery gene
ACFJY4_RS17235 (ACFJY4_17230)	-	3656608..3657172 (+)	565	Protein_3382	transposase	-
ACFJY4_RS17240 (ACFJY4_17235)	-	3657404..3657844 (+)	441	WP_386413423.1	YtoQ family protein	-
ACFJY4_RS17245 (ACFJY4_17240)	cysN	3658138..3660036 (-)	1899	WP_386413425.1	sulfate adenylyltransferase subunit CysN	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 16151.53 Da
• Isoelectric Point: 7.8209

>NTDB_id=1057786 ACFJY4_RS17230 WP_090519242.1 3655003..3655479(+) (pilA) [Stutzerimonas stutzeri strain MBI-RS3]
MKAQMQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVASAVSTVAANKTGVESFIMNYGAFPDGTTAAAAASGNTP
AVVGQRPEDLGIVNPSFGVITLHPGAAGAGKITLTFSSGNPGINTKKVSMDRTAEGTWTCVTDVDAKFIDKACTAGTP

Nucleotide

• Length: 477 bp

>NTDB_id=1057786 ACFJY4_RS17230 WP_090519242.1 3655003..3655479(+) (pilA) [Stutzerimonas stutzeri strain MBI-RS3]
ATGAAAGCTCAGATGCAGAAGGGTTTTACCCTTATTGAATTGATGATCGTTGTGGCGATCATTGGTATTTTGGCTGCGAT
TGCGATTCCGCAGTATCAAAACTATGTTGGACGTTCGAATGTAGCCTCAGCAGTGTCCACTGTGGCCGCTAACAAAACTG
GCGTTGAGTCTTTCATCATGAACTACGGCGCGTTTCCTGATGGGACCACCGCTGCGGCAGCGGCATCTGGTAATACCCCT
GCGGTTGTCGGGCAGCGCCCAGAAGATCTTGGGATCGTTAATCCCTCTTTCGGTGTAATCACATTGCACCCCGGTGCAGC
AGGCGCAGGGAAAATTACGTTGACCTTTTCGTCGGGCAACCCAGGTATCAATACTAAGAAAGTTAGTATGGATCGCACTG
CGGAAGGAACCTGGACATGTGTGACAGACGTAGATGCCAAGTTTATTGACAAGGCTTGTACCGCTGGCACCCCGTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (38-154)

• Prokaryotic N-terminal methylation motif (N_methyl) (6-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Acinetobacter baumannii strain A118	49.367	100	0.494
pilA	Pseudomonas aeruginosa PAK	48.101	100	0.481
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	46.497	99.367	0.462
pilA	Vibrio cholerae strain A1552	46.497	99.367	0.462
pilA	Vibrio cholerae C6706	46.497	99.367	0.462
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.308	98.734	0.418
pilA2	Legionella pneumophila str. Paris	39.073	95.57	0.373
pilA2	Legionella pneumophila strain ERS1305867	39.073	95.57	0.373
pilA/pilAII	Pseudomonas stutzeri DSM 10701	39.597	94.304	0.373
comP	Acinetobacter baylyi ADP1	39.597	94.304	0.373
pilA	Vibrio parahaemolyticus RIMD 2210633	38.255	94.304	0.361