Detailed information NTG1036223

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: AB9V63_RS04755
• Genome accession: NZ_CP166920
• Coordinates: 963793..964224 (+)
• Length: 143 a.a.
• NCBI ID: WP_007246132.1
• Uniprot ID: A0AAW4E7G1
• Organism: Pseudomonas syringae pv. tomato strain GM 113
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 958793..969224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9V63_RS04730 (AB9V63_04730)	yacG	958950..959159 (-)	210	WP_003381207.1	DNA gyrase inhibitor YacG	-
AB9V63_RS04735 (AB9V63_04735)	coaE	959156..959779 (-)	624	WP_005770017.1	dephospho-CoA kinase	-
AB9V63_RS04740 (AB9V63_04740)	pilD	959776..960648 (-)	873	WP_007246135.1	A24 family peptidase	Machinery gene
AB9V63_RS04745 (AB9V63_04745)	pilC	960650..961867 (-)	1218	WP_007246134.1	type II secretion system F family protein	Machinery gene
AB9V63_RS04750 (AB9V63_04750)	pilB	961870..963564 (-)	1695	WP_007246133.1	type IV-A pilus assembly ATPase PilB	Machinery gene
AB9V63_RS04755 (AB9V63_04755)	pilA2	963793..964224 (+)	432	WP_007246132.1	pilin	Machinery gene
AB9V63_RS04760 (AB9V63_04760)	-	964505..964861 (-)	357	WP_007246131.1	helix-turn-helix domain-containing protein	-
AB9V63_RS04765 (AB9V63_04765)	gstA	965020..965640 (+)	621	WP_007246130.1	glutathione transferase GstA	-
AB9V63_RS04770 (AB9V63_04770)	-	965986..966573 (+)	588	WP_010208432.1	DUF433 domain-containing protein	-
AB9V63_RS04775 (AB9V63_04775)	-	966570..966977 (+)	408	WP_007246127.1	hypothetical protein	-
AB9V63_RS04780 (AB9V63_04780)	-	967022..967567 (-)	546	WP_003383227.1	DUF1523 family protein	-
AB9V63_RS04785 (AB9V63_04785)	-	967688..968686 (+)	999	WP_007246126.1	ATP-grasp domain-containing protein	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 14498.75 Da
• Isoelectric Point: 9.1226

>NTDB_id=1036223 AB9V63_RS04755 WP_007246132.1 963793..964224(+) (pilA2) [Pseudomonas syringae pv. tomato strain GM 113]
MKAQKGFTLIELMIVVAIIGILAAVALPAYQDYTIRSKVTEGLTQAASAKLAVAETAANVGGVANVTAANSGFVFNPVAG
TNSYVGAVAVGAGGVITVTTKETGAAVQPVFNLNPVQASPNDQITWTCVRTAGLAKHLPANCR

Nucleotide

• Length: 432 bp

>NTDB_id=1036223 AB9V63_RS04755 WP_007246132.1 963793..964224(+) (pilA2) [Pseudomonas syringae pv. tomato strain GM 113]
ATGAAAGCACAAAAAGGTTTTACGTTGATCGAACTGATGATCGTGGTCGCGATCATCGGTATTTTGGCTGCGGTGGCACT
GCCTGCGTATCAGGATTACACAATCAGAAGTAAGGTTACTGAAGGTCTGACACAGGCGGCGTCGGCGAAGCTGGCAGTTG
CCGAGACTGCTGCGAATGTCGGCGGTGTAGCTAACGTAACGGCGGCGAACTCCGGGTTTGTGTTCAACCCAGTGGCAGGC
ACAAATTCATACGTTGGTGCCGTGGCTGTTGGTGCGGGTGGCGTTATCACTGTAACCACTAAGGAAACCGGAGCGGCGGT
CCAGCCTGTGTTCAACCTAAACCCGGTGCAAGCTTCACCCAACGATCAGATAACCTGGACTTGCGTGAGGACTGCTGGCC
TTGCCAAGCACCTTCCTGCTAACTGCCGGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Pilin (bacterial filament) (Pilin) (36-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	57.447	98.601	0.566
pilA2	Legionella pneumophila strain ERS1305867	57.447	98.601	0.566
pilA	Ralstonia pseudosolanacearum GMI1000	41.765	100	0.497
comP	Acinetobacter baylyi ADP1	43.791	100	0.469
pilE	Neisseria gonorrhoeae MS11	40.506	100	0.448
pilE	Neisseria gonorrhoeae strain FA1090	39.49	100	0.434
pilA/pilA1	Eikenella corrodens VA1	39.103	100	0.427
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.69	100	0.413
pilA	Acinetobacter baumannii strain A118	39.583	100	0.399
pilA	Glaesserella parasuis strain SC1401	36.735	100	0.378
pilA/pilAII	Pseudomonas stutzeri DSM 10701	38.849	97.203	0.378