Detailed information NTG1007807

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H1C92_RS16565
• Genome accession: NZ_LR778141
• Coordinates: 3379173..3380156 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli isolate SC407
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3374173..3385156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1C92_RS16540	-	3375322..3375429 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H1C92_RS16545	-	3375805..3375912 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H1C92_RS16550	-	3376288..3376395 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H1C92_RS16555	yhjV	3376871..3378142 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
H1C92_RS16560	dppF	3378172..3379176 (-)	1005	WP_000107018.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H1C92_RS16565	amiE	3379173..3380156 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H1C92_RS16570	dppC	3380167..3381069 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H1C92_RS16575	dppB	3381079..3382098 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H1C92_RS16580	dppA	3382406..3384013 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=1007807 H1C92_RS16565 WP_001196486.1 3379173..3380156(-) (amiE) [Escherichia coli isolate SC407]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=1007807 H1C92_RS16565 WP_001196486.1 3379173..3380156(-) (amiE) [Escherichia coli isolate SC407]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404