NT genes of 'Pseudomonas sp. THAF42'
| Gene name | Gene type | Function | Related MGE | Organism | Genome accession | Locus tag | Protein ID |
|---|---|---|---|---|---|---|---|
 pilG |
Regulator | Competence regulation | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS02090 | WP_152487647.1 |
| comM |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS02715 | WP_152487715.1 |
| pilQ |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS02735 | WP_152487719.1 |
| pilD |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS04015 | WP_152487864.1 |
| pilC |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS04020 | WP_152487865.1 |
| pilB |
Machinery gene | DNA binding and uptake | Genomic island | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS04025 | WP_152487866.1 |
| pilA |
Machinery gene | DNA binding and uptake | Genomic island | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS04035 | WP_152487868.1 |
| pilR |
Regulator | Competence regulation | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS05020 | WP_134678120.1 |
| pilS |
Regulator | Competence regulation | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS05025 | WP_152487972.1 |
| comA |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS08180 | WP_256663103.1 |
| exbB |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS08185 | WP_037048580.1 |
| pilU |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS12850 | WP_172979150.1 |
| recA |
Machinery gene | Homologous recombination | Genomic island | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS16295 | WP_037053238.1 |
| ssb |
Machinery gene | DNA processing | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS20995 | WP_037055750.1 |
| pilU |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS22180 | WP_037056536.1 |
| pilT |
Machinery gene | DNA binding and uptake | - | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS22185 | WP_037056538.1 |
| pilA |
Machinery gene | DNA binding and uptake | Genomic island | Pseudomonas sp. THAF42 | NZ_CP045359 | FIU98_RS25085 | WP_152487867.1 |
Experimentally validated
Bioinformatically predicted