Salmonella enterica subsp. enterica serovar Dublin strain RM1001

TA loci of Salmonella enterica subsp. enterica serovar Dublin strain RM100

Number of TA loci: experimental0; insolico19

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA270716 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS00940 (tacT) PQQ10_RS00935 (tacA) tacAT/DUF1778(antitoxin)
in_silico TA270717 Prophage Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS01425 (doc) PQQ10_RS01420 (phd) phd-doc/Doc-RelB
in_silico TA270718 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS01630 (yafQ) PQQ10_RS01625 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA270720 GI Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS04045 (vapC) PQQ10_RS04040 (vapB) vapBC/VapC-VagC
in_silico TA270721 IS/Tn Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS04735 (TacT3) PQQ10_RS04740 (TacA3) tacAT/DUF1778(antitoxin)
in_silico TA270726 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS17665 (Hha) PQQ10_RS17660 (TomB) Hha-TomB/-
in_silico TA270729 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS20435 (shpA) PQQ10_RS20430 (shpB) shpAB/BrnT-BrnA
in_silico TA270730 IScluster/Tn Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS20670 (ccdB) PQQ10_RS20675 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270731 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS20875 (relE) PQQ10_RS20880 (relB) relBE/ParE-RelB
in_silico TA270732 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS21450 (TacT2) PQQ10_RS21455 (TacA2) tacAT/DUF1778(antitoxin)
in_silico TA270733 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS22790 (higB) PQQ10_RS22785 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA270734 - Salmonella enterica subsp. enterica serovar Dublin strain RM100 (chromosome) NZ_CP117351 PQQ10_RS22800 (higB) PQQ10_RS22805 (higA) higBA (relBE)/HigB-HigA
in_silico TA270735 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM100 (plasmid pRM100_1) NZ_CP117352 PQQ10_RS23840 (higB) PQQ10_RS23835 (higA) higBA (relBE)/COG4683-HTH_37
in_silico TA270736 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM100 (plasmid pRM100_2) NZ_CP117353 PQQ10_RS24455 (vagD) PQQ10_RS24460 (vagC) vagCD/VapC-VagC
in_silico TA270737 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM100 (plasmid pRM100_2) NZ_CP117353 PQQ10_RS24470 (ccdB) PQQ10_RS24465 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270738 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM100 (plasmid pRM100_2) NZ_CP117353 PQQ10_RS24650 (relE) PQQ10_RS24645 (relB) relBE/ParE-DnaT
experimentalExperimentally validated     insolicoBioinformatically predicted