MGE detailed information
MGE type: Conjugative plasmid MGE length: 103508 bp
Accession: NZ_CP117352 Location: 1..103508 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM100 Replicon: plasmid pRM100_1
Accession: NZ_CP117352 Location: 1..103508 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM100 Replicon: plasmid pRM100_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ10_RS23735 (PQQ10_23735) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| PQQ10_RS23740 (PQQ10_23740) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQQ10_RS23745 (PQQ10_23745) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQQ10_RS23750 (PQQ10_23750) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQQ10_RS23755 (PQQ10_23755) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQQ10_RS23760 (PQQ10_23760) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQQ10_RS23765 (PQQ10_23765) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQQ10_RS23770 (PQQ10_23770) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQQ10_RS23775 (PQQ10_23775) | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| PQQ10_RS23780 (PQQ10_23780) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQQ10_RS23785 (PQQ10_23785) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQQ10_RS23790 (PQQ10_23790) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQQ10_RS23795 (PQQ10_23795) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQQ10_RS23800 (PQQ10_23800) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQQ10_RS23805 (PQQ10_23805) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQQ10_RS23810 (PQQ10_23810) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQQ10_RS23815 (PQQ10_23815) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQQ10_RS23820 (PQQ10_23820) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQQ10_RS23825 (PQQ10_23825) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQQ10_RS23830 (PQQ10_23830) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQQ10_RS23835 (PQQ10_23835) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQQ10_RS23840 (PQQ10_23840) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ10_RS23845 (PQQ10_23845) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQQ10_RS23850 (PQQ10_23850) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQQ10_RS23855 (PQQ10_23855) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQQ10_RS23860 (PQQ10_23860) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQQ10_RS23865 (PQQ10_23865) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQQ10_RS23870 (PQQ10_23870) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQQ10_RS23875 (PQQ10_23875) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQQ10_RS23880 (PQQ10_23880) | 18007..18711 | - | 705 | WP_117051158.1 | IS6 family transposase IS26 | Transposase |
| PQQ10_RS23885 (PQQ10_23885) | 18776..18955 | - | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQQ10_RS23890 (PQQ10_23890) | 19262..19966 | + | 705 | WP_117051158.1 | IS6 family transposase IS26 | Transposase |
| PQQ10_RS23895 (PQQ10_23895) | 20432..21169 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQQ10_RS23900 (PQQ10_23900) | 21166..21390 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQQ10_RS23905 (PQQ10_23905) | 21601..23094 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQQ10_RS23910 (PQQ10_23910) | 23125..24009 | + | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| PQQ10_RS23915 (PQQ10_23915) | 24226..25440 | + | 1215 | WP_012728216.1 | Bicyclomycin resistance protein | ARG |
| PQQ10_RS23920 (PQQ10_23920) | 25468..25773 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| PQQ10_RS23925 (PQQ10_23925) | 25885..26073 | + | 189 | Protein_39 | IS91 family transposase | - |
| PQQ10_RS23930 (PQQ10_23930) | 26040..27239 | - | 1200 | WP_274896075.1 | Tetracycline resistance protein, class C | ARG |
| PQQ10_RS23935 (PQQ10_23935) | 27345..27995 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQQ10_RS23940 (PQQ10_23940) | 28027..28269 | - | 243 | WP_000844627.1 | transposase | - |
| PQQ10_RS23945 (PQQ10_23945) | 28575..29411 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQQ10_RS23950 (PQQ10_23950) | 29411..30214 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQQ10_RS23955 (PQQ10_23955) | 30275..31090 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PQQ10_RS23960 (PQQ10_23960) | 31397..31708 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQQ10_RS23965 (PQQ10_23965) | 31882..32667 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| PQQ10_RS23970 (PQQ10_23970) | 32671..33852 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQQ10_RS23975 (PQQ10_23975) | 33901..34173 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQQ10_RS23980 (PQQ10_23980) | 34226..34861 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQQ10_RS23985 (PQQ10_23985) | 34953..35096 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQQ10_RS23990 (PQQ10_23990) | 35423..35800 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| PQQ10_RS23995 (PQQ10_23995) | 35793..36074 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQQ10_RS24000 (PQQ10_24000) | 36049..36723 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQQ10_RS24005 (PQQ10_24005) | 36716..37222 | + | 507 | WP_000566443.1 | hypothetical protein | - |
| PQQ10_RS24010 (PQQ10_24010) | 37228..37539 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQQ10_RS24015 (PQQ10_24015) | 37548..38048 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| PQQ10_RS24020 (PQQ10_24020) | 38052..39479 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQQ10_RS24025 (PQQ10_24025) | 39479..40135 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQQ10_RS24030 (PQQ10_24030) | 40190..40807 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQQ10_RS24035 (PQQ10_24035) | 41040..41318 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQQ10_RS24040 (PQQ10_24040) | 41409..41897 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQQ10_RS24045 (PQQ10_24045) | 41912..44104 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQQ10_RS24050 (PQQ10_24050) | 44104..44337 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQQ10_RS24055 (PQQ10_24055) | 44319..44936 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQQ10_RS24060 (PQQ10_24060) | 45104..48076 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQQ10_RS24065 (PQQ10_24065) | 48073..49938 | + | 1866 | WP_077779971.1 | conjugative transfer system coupling protein TraD | - |
| PQQ10_RS24070 (PQQ10_24070) | 49988..50533 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQQ10_RS24075 (PQQ10_24075) | 50490..51119 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQQ10_RS24080 (PQQ10_24080) | 51129..51596 | + | 468 | WP_274896076.1 | hypothetical protein | - |
| PQQ10_RS24085 (PQQ10_24085) | 51583..51960 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQQ10_RS24090 (PQQ10_24090) | 51960..52622 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQQ10_RS24095 (PQQ10_24095) | 52958..53323 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQQ10_RS24100 (PQQ10_24100) | 53468..53749 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQQ10_RS24105 (PQQ10_24105) | 53746..54372 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQQ10_RS24110 (PQQ10_24110) | 54356..55273 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| PQQ10_RS24115 (PQQ10_24115) | 55273..56586 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| PQQ10_RS24120 (PQQ10_24120) | 56583..57161 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQQ10_RS24125 (PQQ10_24125) | 57165..57557 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQQ10_RS24130 (PQQ10_24130) | 57842..59104 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQQ10_RS24135 (PQQ10_24135) | 59428..60573 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PQQ10_RS24140 (PQQ10_24140) | 60667..61248 | + | 582 | WP_058663077.1 | lipocalin family protein | - |
| PQQ10_RS24145 (PQQ10_24145) | 61194..61898 | - | 705 | WP_117051158.1 | IS6 family transposase IS26 | Transposase |
| PQQ10_RS24150 (PQQ10_24150) | 62051..62866 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQQ10_RS24155 (PQQ10_24155) | 63056..63760 | - | 705 | WP_117051158.1 | IS6 family transposase IS26 | Transposase |
| PQQ10_RS24160 (PQQ10_24160) | 63825..65075 | - | 1251 | Protein_86 | transposase | - |
| PQQ10_RS24165 (PQQ10_24165) | 65150..65818 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| PQQ10_RS24170 (PQQ10_24170) | 65854..66090 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| PQQ10_RS24175 (PQQ10_24175) | 66087..66449 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| PQQ10_RS24180 (PQQ10_24180) | 66467..66964 | - | 498 | Protein_90 | mercuric reductase | - |
| PQQ10_RS24185 (PQQ10_24185) | 67125..67961 | - | 837 | WP_012728227.1 | Beta-lactamase TEM | ARG |
| PQQ10_RS24190 (PQQ10_24190) | 68001..68704 | - | 704 | Protein_92 | IS6 family transposase IS15DI | Transposase |
| PQQ10_RS24195 (PQQ10_24195) | 68914..69903 | - | 990 | WP_001276635.1 | putative signaling protein | VF |
| PQQ10_RS24200 (PQQ10_24200) | 69900..70136 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| PQQ10_RS24205 (PQQ10_24205) | 70133..70498 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| PQQ10_RS24210 (PQQ10_24210) | 70610..71248 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| PQQ10_RS24215 (PQQ10_24215) | 71263..72948 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| PQQ10_RS24220 (PQQ10_24220) | 73020..73295 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| PQQ10_RS24225 (PQQ10_24225) | 73311..73661 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| PQQ10_RS24230 (PQQ10_24230) | 73733..74167 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| PQQ10_RS24235 (PQQ10_24235) | 74267..75271 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| PQQ10_RS24240 (PQQ10_24240) | 75548..75667 | + | 120 | Protein_102 | permease | - |
| PQQ10_RS24245 (PQQ10_24245) | 75677..75793 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| PQQ10_RS24250 (PQQ10_24250) | 75914..76288 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| PQQ10_RS24255 (PQQ10_24255) | 76402..77127 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| PQQ10_RS24260 (PQQ10_24260) | 77368..81513 | + | 4146 | WP_011872905.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ10_RS24265 (PQQ10_24265) | 81503..81925 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQQ10_RS24270 (PQQ10_24270) | 82096..82548 | + | 453 | Protein_108 | hypothetical protein | - |
| PQQ10_RS24275 (PQQ10_24275) | 82564..83166 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| PQQ10_RS24280 (PQQ10_24280) | 83434..83715 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQQ10_RS24285 (PQQ10_24285) | 84014..84550 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQQ10_RS24290 (PQQ10_24290) | 84553..85563 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQQ10_RS24295 (PQQ10_24295) | 85568..86437 | + | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
| PQQ10_RS24300 (PQQ10_24300) | 86434..86925 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQQ10_RS24305 (PQQ10_24305) | 87252..88127 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQQ10_RS24310 (PQQ10_24310) | 88281..89321 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| PQQ10_RS24315 (PQQ10_24315) | 89608..91119 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQQ10_RS24320 (PQQ10_24320) | 91230..92270 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQQ10_RS24325 (PQQ10_24325) | 92272..93705 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| PQQ10_RS24330 (PQQ10_24330) | 93718..97332 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQQ10_RS24335 (PQQ10_24335) | 97370..97732 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| PQQ10_RS24340 (PQQ10_24340) | 98448..98720 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQQ10_RS24345 (PQQ10_24345) | 98720..99253 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQQ10_RS24350 (PQQ10_24350) | 99264..99872 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQQ10_RS24355 (PQQ10_24355) | 99869..100420 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| PQQ10_RS24360 (PQQ10_24360) | 100480..100899 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQQ10_RS24365 (PQQ10_24365) | 100901..101194 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQQ10_RS24370 (PQQ10_24370) | 101211..102194 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQQ10_RS24375 (PQQ10_24375) | 102693..103232 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|