MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117351 Location: 4188460..4191563 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM100 Replicon: chromosome
Accession: NZ_CP117351 Location: 4188460..4191563 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ10_RS20640 (4183749) | 4183749..4184195 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQQ10_RS20645 (4184192) | 4184192..4186636 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQQ10_RS20650 (4186653) | 4186653..4187393 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQQ10_RS20655 (4187515) | 4187515..4188045 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQQ10_RS20660 (4188368) | 4188368..4189501 | + | 1134 | Protein_4045 | IS3 family transposase | - |
| PQQ10_RS20665 (4189533) | 4189533..4189673 | - | 141 | Protein_4046 | Arm DNA-binding domain-containing protein | - |
| PQQ10_RS20670 (4190079) | 4190079..4190387 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQQ10_RS20675 (4190390) | 4190390..4190629 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQQ10_RS20680 (4190738) | 4190738..4190986 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQQ10_RS20685 (4191177) | 4191177..4191608 | - | 432 | Protein_4050 | IS630 family transposase ISEc33 | Transposase |
| PQQ10_RS20695 (4192365) | 4192365..4193384 | + | 1020 | Protein_4051 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQQ10_RS20700 (4193412) | 4193412..4193942 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQQ10_RS20705 (4194159) | 4194159..4195190 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQQ10_RS20710 (4195215) | 4195215..4195979 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|