MGE detailed information
MGE type: Genomic_island MGE length: 11361 bp
Accession: NZ_CP117351 Location: 833651..845011 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM100 Replicon: chromosome
Accession: NZ_CP117351 Location: 833651..845011 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ10_RS04005 (829097) | 829097..830195 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQQ10_RS04010 (830205) | 830205..831722 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQQ10_RS04015 (831798) | 831798..832343 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQQ10_RS04020 (832608) | 832608..833366 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQQ10_RS04030 (833651) | 833651..834457 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| PQQ10_RS04035 (834737) | 834737..834988 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| PQQ10_RS04040 (835197) | 835197..835424 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQQ10_RS04045 (835424) | 835424..835822 | + | 399 | WP_274896049.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQQ10_RS04050 (836631) | 836631..837167 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| PQQ10_RS04055 (837214) | 837214..837846 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQQ10_RS04060 (838565) | 838565..839146 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| PQQ10_RS04065 (839266) | 839266..841753 | + | 2488 | Protein_795 | Outer membrane usher protein PapC | VF |
| PQQ10_RS04070 (841794) | 841794..842537 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| PQQ10_RS04075 (842534) | 842534..843610 | + | 1077 | WP_000141331.1 | hypothetical protein | - |
| PQQ10_RS04080 (843754) | 843754..844266 | + | 513 | WP_000336258.1 | CaiF/GrlA family transcriptional regulator | - |
| PQQ10_RS04085 (844253) | 844253..845011 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQQ10_RS04090 (845221) | 845221..846087 | - | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| PQQ10_RS04095 (846208) | 846208..846480 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQQ10_RS04100 (846511) | 846511..847740 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PQQ10_RS04105 (847882) | 847882..848337 | - | 456 | WP_001574932.1 | multidrug/biocide efflux PACE transporter | - |
| PQQ10_RS04110 (848441) | 848441..849304 | + | 864 | WP_001270781.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |