Escherichia coli strain RIVM_C0396291

TA loci of Escherichia coli strain RIVM_C039629

Number of TA loci: experimental0; insolico23

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA224022 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS00985 (hicA) LN353_RS00990 (hicB) hicAB/HicA-HicB
in_silico TA224023 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS03375 (yhaV) LN353_RS03380 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA224027 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS06060 (mazF) LN353_RS06055 (mazE) mazEF/PRK09907-MazE
in_silico TA224028 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS06430 (higB) LN353_RS06435 (higA) higBA (relBE)/HigB-HigA
in_silico TA224037 IS/Tn Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS12970 (hipA) LN353_RS12965 (hipB) hipBA/HipA-HipB
in_silico TA224038 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS13415 (hicA) LN353_RS13410 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA224039 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS15365 (TacT2) LN353_RS15360 (TacA2) tacAT/DUF1778(antitoxin)
in_silico TA224040 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS16575 (relE) LN353_RS16580 (relB) relBE/RelE-HTH_XRE
in_silico TA224041 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS18690 (Hha) LN353_RS18685 (TomB) Hha-TomB/-
in_silico TA224042 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS19650 (mosT) LN353_RS19655 (mosA) mosAT/AbiEii-AbiEi
in_silico TA224043 GI Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS19735 (yafO) LN353_RS19740 (yafN) yafN-yafO (relBE)/YafO-YafN
in_silico TA224044 IS/Tn Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS21315 (shpA) LN353_RS21310 (shpB) shpAB/BrnT-BrnA
in_silico TA224045 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS22085 (chpB) LN353_RS22090 (chpS) chpSB/PRK09812-ChpS
in_silico TA224047 - Escherichia coli strain RIVM_C039629 (chromosome) NZ_CP086616 LN353_RS23910 (higB) LN353_RS23905 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA224048 Plasmid Escherichia coli strain RIVM_C039629 (plasmid pRIVM_C039629_1) NZ_CP086617 LN353_RS25265 (relE) LN353_RS25260 (relB) relBE/RHH(antitoxin)
in_silico TA224049 Plasmid Escherichia coli strain RIVM_C039629 (plasmid pRIVM_C039629_1) NZ_CP086617 LN353_RS25320 (ccdB) LN353_RS25315 (ccdA) ccdAB/CcdA(antitoxin)
experimentalExperimentally validated     insolicoBioinformatically predicted