MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086616 Location: 4069135..4079893 Organism: Escherichia coli strain RIVM_C039629 Replicon: chromosome
Accession: NZ_CP086616 Location: 4069135..4079893 Organism: Escherichia coli strain RIVM_C039629 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN353_RS19655 (4064481) | 4064481..4065263 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN353_RS19660 (4065579) | 4065579..4068788 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN353_RS19665 (4069135) | 4069135..4069605 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN353_RS19670 (4069602) | 4069602..4069704 | + | 103 | Protein_3859 | helix-turn-helix domain-containing protein | - |
| LN353_RS19675 (4069796) | 4069796..4069954 | + | 159 | Protein_3860 | integrase | - |
| LN353_RS19685 (4070159) | 4070159..4071412 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN353_RS19690 (4071424) | 4071424..4072527 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN353_RS19695 (4072815) | 4072815..4073870 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN353_RS19700 (4073909) | 4073909..4074310 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4075028) | 4075028..4075108 | - | 81 | NuclAT_10 | - | - |
| - (4075028) | 4075028..4075108 | - | 81 | NuclAT_10 | - | - |
| - (4075028) | 4075028..4075108 | - | 81 | NuclAT_10 | - | - |
| - (4075028) | 4075028..4075108 | - | 81 | NuclAT_10 | - | - |
| LN353_RS19705 (4074368) | 4074368..4075612 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN353_RS19710 (4075704) | 4075704..4076162 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN353_RS19715 (4076423) | 4076423..4077880 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN353_RS19720 (4077937) | 4077937..4078289 | - | 353 | Protein_3868 | peptide chain release factor H | - |
| LN353_RS19725 (4078285) | 4078285..4078491 | - | 207 | Protein_3869 | RtcB family protein | - |
| LN353_RS19730 (4078737) | 4078737..4079189 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN353_RS19735 (4079199) | 4079199..4079597 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN353_RS19740 (4079600) | 4079600..4079893 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN353_RS19745 (4079945) | 4079945..4081000 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN353_RS19750 (4081071) | 4081071..4081856 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN353_RS19755 (4081828) | 4081828..4083540 | + | 1713 | Protein_3875 | flagellar biosynthesis protein FlhA | - |
| LN353_RS19760 (4083645) | 4083645..4083923 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN353_RS19765 (4083916) | 4083916..4084272 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|