Escherichia coli strain CS18F1

TA loci of Escherichia coli strain CS18F

Number of TA loci: experimental0; insolico27

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA202416 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS00700 (yhaV) KHZ70_RS00705 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA202420 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS04565 (vapC) KHZ70_RS04560 (vapB) vapBC/VapC-VagC
in_silico TA202429 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS09980 (hipA) KHZ70_RS09975 (hipB) hipBA/HipA-HipB
in_silico TA202430 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS10330 (hicA) KHZ70_RS10325 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA202431 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS11885 (TacT2) KHZ70_RS11880 (TacA2) tacAT/DUF1778(antitoxin)
in_silico TA202432 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS13070 (relE) KHZ70_RS13075 (relB) relBE/RelE-HTH_XRE
in_silico TA202433 GI Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS15110 (higB) KHZ70_RS15105 (higA) higBA (relBE)/HigB-HTH_XRE
in_silico TA202434 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS15225 (Hha) KHZ70_RS15220 (TomB) Hha-TomB/-
in_silico TA202438 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS20415 (higB) KHZ70_RS20410 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA202442 - Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS22670 (hicA) KHZ70_RS22675 (hicB) hicAB/-
in_silico TA202443 Prophage Escherichia coli strain CS18F (chromosome) NZ_CP074576 KHZ70_RS22825 (doc) KHZ70_RS22820 (phd) phd-doc/Doc-RelB
in_silico TA202447 Plasmid Escherichia coli strain CS18F (plasmid pCS18F-NDM-Fos) NZ_CP074577 KHZ70_RS24045 (ccdB) KHZ70_RS24050 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA202448 Plasmid Escherichia coli strain CS18F (plasmid pCS18F-NDM-Fos) NZ_CP074577 KHZ70_RS24070 (vagD) KHZ70_RS24065 (vagC) vagCD/VapC-VagC
in_silico TA202449 Plasmid IS/Tn Escherichia coli strain CS18F (plasmid pCS18F-NDM-Fos) NZ_CP074577 KHZ70_RS24085 (vagD) KHZ70_RS24080 (vagC) vagCD/VapC-VagC
in_silico TA202450 Plasmid Escherichia coli strain CS18F (plasmid pCS18F-NDM-Fos) NZ_CP074577 KHZ70_RS24640 (relE) KHZ70_RS24645 (relB) relBE/ParE-YafN
experimentalExperimentally validated     insolicoBioinformatically predicted