MGE detailed information
MGE type: Genomic_island MGE length: 95248 bp
Accession: NZ_CP012666 Location: 304645..399892 Organism: Vibrio cholerae strain ICDC-VC661 Replicon: chromosome
Accession: NZ_CP012666 Location: 304645..399892 Organism: Vibrio cholerae strain ICDC-VC661 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN947_RS01320 () | 300406..301557 | + | 1152 | WP_001018595.1 | site-specific integrase | - |
| AN947_RS01325 () | 301603..302583 | + | 981 | WP_000019370.1 | IS5-like element ISVch5 family transposase | - |
| AN947_RS01330 () | 302877..304124 | + | 1248 | WP_000196223.1 | hypothetical protein | - |
| AN947_RS01335 () | 304645..305175 | + | 531 | WP_000237645.1 | type VI secretion system PAAR protein | - |
| AN947_RS01340 () | 305175..305846 | + | 672 | WP_000132861.1 | hypothetical protein | - |
| AN947_RS20705 () | 305971..306198 | + | 228 | WP_001911595.1 | hypothetical protein | - |
| AN947_RS01350 () | 306467..308395 | + | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| AN947_RS01355 () | 308399..308950 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| AN947_RS01360 () | 309054..309248 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| AN947_RS01365 () | 309290..309643 | + | 354 | WP_096068346.1 | 50S ribosomal protein L20 | - |
| AN947_RS01370 () | 309725..310687 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| AN947_RS01380 () | 311167..311334 | + | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| AN947_RS01385 () | 311363..311689 | + | 327 | WP_001921550.1 | hypothetical protein | - |
| AN947_RS20710 () | 311733..311822 | + | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| AN947_RS01405 () | 312486..312668 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| AN947_RS01410 () | 312924..313175 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| AN947_RS01415 () | 313148..313297 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| AN947_RS01420 () | 313328..313759 | + | 432 | WP_000795498.1 | hypothetical protein | - |
| AN947_RS01425 () | 313910..314539 | + | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| AN947_RS01435 () | 314695..315447 | + | 753 | WP_000116045.1 | putative oxidoreductase YgfF | VF |
| AN947_RS01440 () | 315545..315724 | + | 180 | WP_001203705.1 | hypothetical protein | - |
| AN947_RS01445 () | 315749..315931 | + | 183 | WP_000923334.1 | DUF645 family protein | - |
| AN947_RS01455 () | 316136..316513 | + | 378 | WP_000411106.1 | hypothetical protein | - |
| AN947_RS01460 () | 316809..316991 | + | 183 | WP_000923340.1 | DUF645 family protein | - |
| AN947_RS01465 () | 317345..317527 | + | 183 | WP_000923153.1 | DUF645 family protein | - |
| AN947_RS01470 () | 317722..318399 | + | 678 | WP_000254617.1 | HNH endonuclease | - |
| AN947_RS01475 () | 318561..319758 | + | 1198 | Protein_272 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| AN947_RS01480 () | 319920..320624 | + | 705 | WP_000087610.1 | HNH endonuclease | - |
| AN947_RS01485 () | 320782..321120 | + | 339 | WP_000713853.1 | hypothetical protein | - |
| AN947_RS01490 () | 321274..321591 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS01495 () | 321610..321852 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AN947_RS01500 () | 322096..322482 | + | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| AN947_RS01505 () | 322539..322652 | + | 114 | WP_001900214.1 | hypothetical protein | - |
| AN947_RS01510 () | 322601..322882 | + | 282 | WP_001894429.1 | DUF1289 domain-containing protein | - |
| AN947_RS01520 () | 323140..323676 | + | 537 | WP_000469482.1 | GNAT family N-acetyltransferase | - |
| AN947_RS01525 () | 323813..324328 | + | 516 | WP_001201509.1 | lipocalin family protein | - |
| AN947_RS01535 () | 324478..324975 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AN947_RS01540 () | 324972..325244 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AN947_RS01550 () | 325637..325762 | + | 126 | WP_001900195.1 | DUF645 family protein | - |
| AN947_RS20715 () | 325778..325816 | + | 39 | WP_106019118.1 | hypothetical protein | - |
| AN947_RS01560 () | 326012..326458 | + | 447 | WP_000006157.1 | hypothetical protein | - |
| AN947_RS01570 () | 326606..326875 | - | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| AN947_RS01575 () | 326868..327146 | - | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| AN947_RS01585 () | 327432..327710 | + | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| AN947_RS20720 () | 327962..328168 | + | 207 | Protein_290 | DUF3709 domain-containing protein | - |
| AN947_RS20725 () | 328368..328469 | + | 102 | WP_001921603.1 | hypothetical protein | - |
| AN947_RS01590 () | 328459..328845 | + | 387 | WP_000703163.1 | VOC family protein | - |
| AN947_RS01595 () | 329040..329291 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| AN947_RS01600 () | 329264..329413 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| AN947_RS01605 () | 329505..329747 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| AN947_RS01610 () | 329999..330277 | + | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| AN947_RS20730 () | 330652..330795 | + | 144 | Protein_297 | DUF645 family protein | - |
| AN947_RS20735 () | 330849..330887 | + | 39 | WP_082798268.1 | hypothetical protein | - |
| AN947_RS01635 () | 331099..331566 | + | 468 | WP_001289288.1 | OsmC family protein | - |
| AN947_RS01640 () | 331694..332356 | + | 663 | WP_000960654.1 | hypothetical protein | - |
| AN947_RS01650 () | 332541..332807 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| AN947_RS01655 () | 332794..333039 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| AN947_RS01665 () | 333135..333929 | + | 795 | WP_001911581.1 | hypothetical protein | - |
| AN947_RS01675 () | 334032..334160 | + | 129 | WP_071908338.1 | general secretion pathway protein GspI | - |
| AN947_RS01680 () | 334221..334403 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| AN947_RS01685 () | 334603..335076 | + | 474 | WP_001161076.1 | GrpB family protein | - |
| AN947_RS01690 () | 335091..335183 | + | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| AN947_RS01695 () | 335225..335851 | + | 627 | WP_000365424.1 | LysE family translocator | - |
| AN947_RS01700 () | 335974..336672 | + | 699 | WP_001890502.1 | hypothetical protein | - |
| AN947_RS01705 () | 336682..336792 | + | 111 | WP_079857360.1 | DUF3265 domain-containing protein | - |
| AN947_RS01720 () | 337370..337549 | + | 180 | WP_001883058.1 | DUF645 family protein | - |
| AN947_RS01725 () | 337763..338158 | + | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| AN947_RS01730 () | 338286..338585 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS01735 () | 338582..338824 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| AN947_RS01740 () | 339053..339631 | + | 579 | WP_000110120.1 | hypothetical protein | - |
| AN947_RS01745 () | 339653..339745 | + | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| AN947_RS01755 () | 340169..340852 | + | 684 | WP_000877436.1 | hypothetical protein | - |
| AN947_RS01760 () | 341066..341332 | + | 267 | WP_000937852.1 | hypothetical protein | - |
| AN947_RS01770 () | 341487..342086 | + | 600 | WP_000429495.1 | hypothetical protein | - |
| AN947_RS01775 () | 342367..343302 | + | 936 | WP_000051985.1 | restriction endonuclease | - |
| AN947_RS01780 () | 343268..343408 | + | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| AN947_RS01785 () | 343520..344541 | + | 1022 | Protein_322 | hypothetical protein | - |
| AN947_RS01790 () | 344582..345088 | + | 507 | WP_001921103.1 | hypothetical protein | - |
| AN947_RS01795 () | 345149..345844 | - | 696 | WP_000213836.1 | hypothetical protein | - |
| AN947_RS01805 () | 347436..348443 | + | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| AN947_RS20740 () | 348440..348550 | + | 111 | Protein_327 | DUF3265 domain-containing protein | - |
| AN947_RS01815 () | 348668..348946 | + | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| AN947_RS01820 () | 349423..349593 | + | 171 | WP_001911568.1 | hypothetical protein | - |
| AN947_RS01825 () | 349896..350077 | + | 182 | Protein_330 | DUF645 family protein | - |
| AN947_RS01830 () | 350254..350649 | + | 396 | WP_000046953.1 | hypothetical protein | - |
| AN947_RS01835 () | 350793..351329 | + | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| AN947_RS01840 () | 351626..351805 | + | 180 | WP_001883039.1 | DUF645 family protein | - |
| AN947_RS01845 () | 352001..352426 | + | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| AN947_RS01850 () | 352575..352922 | + | 348 | WP_000933409.1 | hypothetical protein | - |
| AN947_RS20745 () | 353069..353362 | + | 294 | WP_125460920.1 | hypothetical protein | - |
| AN947_RS20750 () | 353718..353813 | + | 96 | WP_001907607.1 | DUF645 family protein | - |
| AN947_RS01865 () | 354007..354324 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS01870 () | 354343..354585 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AN947_RS01875 () | 354827..355336 | + | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| AN947_RS01880 () | 355393..356046 | + | 654 | WP_000226874.1 | hypothetical protein | - |
| AN947_RS01885 () | 356356..356574 | + | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| AN947_RS01895 () | 356977..357210 | + | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| AN947_RS01900 () | 357635..357815 | + | 181 | Protein_344 | DUF645 family protein | - |
| AN947_RS01905 () | 358082..358369 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS01910 () | 358380..358697 | + | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| AN947_RS20755 () | 358694..358804 | + | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| AN947_RS01920 () | 358981..359106 | + | 126 | WP_001944767.1 | DUF645 family protein | - |
| AN947_RS20760 () | 359122..359160 | + | 39 | WP_106019119.1 | hypothetical protein | - |
| AN947_RS01930 () | 359373..360377 | + | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| AN947_RS01935 () | 360530..360976 | + | 447 | WP_000128977.1 | hypothetical protein | - |
| AN947_RS01940 () | 361096..362025 | + | 930 | WP_000335802.1 | hypothetical protein | - |
| AN947_RS01945 () | 362022..362132 | + | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| AN947_RS01950 () | 362160..362636 | + | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| AN947_RS01955 () | 362773..363288 | + | 516 | WP_001201532.1 | lipocalin family protein | - |
| AN947_RS01960 () | 363424..363714 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS01965 () | 363704..363952 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AN947_RS01975 () | 364523..365176 | + | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| AN947_RS01980 () | 365448..365873 | + | 426 | WP_000415748.1 | hypothetical protein | - |
| AN947_RS01985 () | 366081..366476 | + | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| AN947_RS01990 () | 366627..367157 | + | 531 | WP_000415563.1 | hypothetical protein | - |
| AN947_RS01995 () | 367295..367795 | + | 501 | WP_000789723.1 | hypothetical protein | - |
| AN947_RS02005 () | 367951..368349 | + | 399 | WP_001882293.1 | hypothetical protein | - |
| AN947_RS02010 () | 368449..368913 | - | 465 | WP_000140244.1 | hypothetical protein | - |
| AN947_RS02015 () | 369296..370281 | - | 986 | Protein_365 | Sulfate-binding protein | VF |
| AN947_RS02020 () | 370532..371110 | + | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| AN947_RS02035 () | 371414..371584 | + | 171 | WP_001882300.1 | DUF645 family protein | - |
| AN947_RS02040 () | 371907..372521 | + | 615 | WP_000789575.1 | hypothetical protein | - |
| AN947_RS02045 () | 372668..373525 | + | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| AN947_RS02050 () | 373681..374232 | + | 552 | WP_000821930.1 | hypothetical protein | - |
| AN947_RS20765 () | 374519..374722 | + | 204 | WP_001911745.1 | hypothetical protein | - |
| AN947_RS20770 () | 375003..375176 | + | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| AN947_RS02060 () | 375536..375805 | + | 270 | WP_001198131.1 | hypothetical protein | - |
| AN947_RS02070 () | 376123..376294 | + | 172 | Protein_374 | DUF645 family protein | - |
| AN947_RS02075 () | 376503..376889 | + | 387 | WP_000703163.1 | VOC family protein | - |
| AN947_RS02080 () | 377091..377333 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| AN947_RS02085 () | 377504..377881 | + | 378 | WP_000411109.1 | hypothetical protein | - |
| AN947_RS20775 () | 377938..378052 | + | 115 | Protein_378 | acetyltransferase | - |
| AN947_RS02090 () | 378001..378282 | + | 282 | WP_001894453.1 | DUF1289 domain-containing protein | - |
| AN947_RS02105 () | 378448..378561 | + | 114 | WP_001889158.1 | hypothetical protein | - |
| AN947_RS02110 () | 378510..378737 | + | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| AN947_RS02125 () | 379078..379410 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS02130 () | 379397..379711 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| AN947_RS02140 () | 379848..380282 | + | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| AN947_RS20780 () | 380450..380605 | + | 156 | WP_000751734.1 | hypothetical protein | - |
| AN947_RS02150 () | 380730..381710 | - | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| AN947_RS02155 () | 381778..382084 | + | 307 | Protein_387 | Streptogramin A acetyltransferase | VF |
| AN947_RS02160 () | 382221..382913 | + | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| AN947_RS02165 () | 382913..383314 | + | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| AN947_RS02170 () | 383284..383427 | + | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| AN947_RS02175 () | 383502..383915 | + | 414 | WP_000049417.1 | VOC family protein | - |
| AN947_RS02180 () | 384129..384380 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AN947_RS02185 () | 384370..384657 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS02190 () | 384785..385240 | + | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| AN947_RS02200 () | 385562..385714 | + | 153 | WP_001884520.1 | DUF645 family protein | - |
| AN947_RS02210 () | 385916..386413 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AN947_RS02215 () | 386410..386682 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AN947_RS02225 () | 386913..387581 | + | 669 | WP_000043871.1 | hypothetical protein | - |
| AN947_RS02230 () | 387733..388020 | + | 288 | WP_000426470.1 | hypothetical protein | - |
| AN947_RS02235 () | 388161..388532 | + | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| AN947_RS20785 () | 388599..389024 | + | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AN947_RS02245 () | 389021..389554 | + | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AN947_RS02255 () | 389756..390013 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AN947_RS02260 () | 390001..390303 | + | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN947_RS02270 () | 390537..391454 | + | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| AN947_RS02280 () | 391611..392000 | + | 390 | WP_001081302.1 | hypothetical protein | - |
| AN947_RS02285 () | 392136..392345 | + | 210 | Protein_407 | GNAT family N-acetyltransferase | - |
| AN947_RS02290 () | 392464..392901 | + | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| AN947_RS02295 () | 392965..393183 | + | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| AN947_RS02300 () | 393358..394230 | + | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| AN947_RS02305 () | 394380..394979 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| AN947_RS20790 () | 395036..395140 | + | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| AN947_RS02310 () | 395171..395440 | + | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| AN947_RS02315 () | 395434..395955 | + | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| AN947_RS02325 () | 396254..396379 | + | 126 | WP_001905700.1 | DUF645 family protein | - |
| AN947_RS02335 () | 396630..397025 | + | 396 | WP_001000867.1 | hypothetical protein | - |
| AN947_RS02340 () | 397164..397442 | - | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| AN947_RS02345 () | 397439..397723 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| AN947_RS02350 () | 397917..398432 | + | 516 | WP_000343779.1 | dTDP-fucosamine acetyltransferase | VF |
| AN947_RS02355 () | 398616..399029 | + | 414 | WP_000049420.1 | VOC family protein | - |
| AN947_RS02365 () | 399584..400761 | + | 1178 | WP_086010879.1 | IS3-like element ISVch4 family transposase | - |
| AN947_RS02370 () | 401180..403957 | + | 2778 | WP_000509635.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|