MGE detailed information
MGE type: Prophage MGE length: 29320 bp
Accession: NC_006351 Location: 516820..546139 Organism: Burkholderia pseudomallei K96243 Replicon: chromosome
Accession: NC_006351 Location: 516820..546139 Organism: Burkholderia pseudomallei K96243 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BPS_RS20710 (BPSS0373) | 512336..512944 | - | 609 | WP_004202253.1 | TIGR00645 family protein | - |
| BPS_RS20715 (BPSS0374) | 513177..514076 | - | 900 | WP_004525413.1 | DMT family transporter | - |
| BPS_RS20720 (BPSS0375) | 514366..516348 | + | 1983 | WP_004188376.1 | acetate--CoA ligase | - |
| BPS_RS20725 (BPSS0376) | 516506..516826 | + | 321 | WP_004196029.1 | DUF4212 domain-containing protein | - |
| BPS_RS20730 (BPSS0377) | 516820..518835 | + | 2016 | WP_004525415.1 | cation acetate symporter | - |
| BPS_RS20740 (BPSS0378) | 519142..520371 | + | 1230 | WP_004552508.1 | Prophage integrase IntA ; Integrase | Integrase |
| BPS_RS20745 (BPSS0380) | 521079..521324 | + | 246 | WP_011205394.1 | helix-turn-helix domain-containing protein | - |
| BPS_RS20750 (BPSS0380A) | 521458..521663 | - | 206 | Protein_427 | hypothetical protein | - |
| BPS_RS20755 | 521916..522215 | - | 300 | WP_017844216.1 | H-NS histone family protein | - |
| BPS_RS20760 (BPSS0381) | 522475..522720 | + | 246 | WP_011205395.1 | helix-turn-helix domain-containing protein | - |
| BPS_RS20765 (BPSS0382) | 522852..525704 | - | 2853 | WP_004552514.1 | DUF927 domain-containing protein | - |
| BPS_RS20770 | 525847..525951 | - | 105 | WP_004552515.1 | hypothetical protein | - |
| BPS_RS20775 (BPSS0383) | 526300..526518 | - | 219 | WP_004552321.1 | AlpA family phage regulatory protein | - |
| BPS_RS20780 (BPSS0384) | 526611..527657 | - | 1047 | WP_004552320.1 | hypothetical protein | - |
| BPS_RS20785 | 527939..528157 | - | 219 | WP_004552319.1 | hypothetical protein | - |
| BPS_RS20790 (BPSS0385) | 529868..532291 | + | 2424 | WP_004552316.1 | AAA family ATPase | - |
| BPS_RS20795 (BPSS0386) | 532668..533243 | + | 576 | WP_004552315.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BPS_RS20800 (BPSS0387) | 533314..534429 | - | 1116 | WP_004552314.1 | DUF3396 domain-containing protein | - |
| BPS_RS20805 (BPSS0388) | 534439..535173 | - | 735 | WP_004552313.1 | VRR-NUC domain-containing protein | - |
| BPS_RS20810 (BPSS0389) | 535170..535697 | - | 528 | WP_004552312.1 | hypothetical protein | VF |
| BPS_RS20815 (BPSS0390) | 535977..536156 | + | 180 | WP_009893919.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BPS_RS20820 (BPSS0391) | 536201..536617 | + | 417 | WP_004552310.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BPS_RS20825 (BPSS0391A) | 537046..537543 | - | 498 | WP_004552308.1 | hypothetical protein | - |
| BPS_RS20830 (BPSS0392) | 538161..538568 | - | 408 | Protein_443 | IS3 family transposase ISBps2 | Transposase |
| BPS_RS20835 (BPSS0394) | 539214..539498 | - | 285 | WP_004525420.1 | BrnA antitoxin family protein | Antitoxin Detail |
| BPS_RS20840 (BPSS0395) | 539482..539655 | - | 174 | WP_009939402.1 | BrnT family toxin | Toxin Detail |
| BPS_RS20845 (BPSS0396) | 540323..540598 | + | 276 | WP_004552388.1 | bacteriophage protein Gp49 | - |
| BPS_RS20850 (BPSS0397) | 540608..540739 | + | 132 | WP_009923452.1 | bacteriophage protein Gp48 | - |
| BPS_RS20855 (BPSS0398) | 540875..541096 | + | 222 | WP_004552390.1 | hypothetical protein | - |
| BPS_RS20860 | 541063..541362 | + | 300 | WP_160469016.1 | hypothetical protein | - |
| BPS_RS20865 (BPSS0400) | 541537..542127 | - | 591 | WP_038717720.1 | hypothetical protein | - |
| BPS_RS20870 (BPSS0401) | 542377..542526 | + | 150 | WP_004537646.1 | bacteriophage protein Gp44 | - |
| BPS_RS20875 (BPSS0402) | 542523..543296 | + | 774 | Protein_452 | IS3 family transposase ISBps2 | Transposase |
| BPS_RS32135 | 543294..543698 | + | 405 | Protein_453 | IS3 family transposase ISBps2 | Transposase |
| BPS_RS20880 (BPSS0402A) | 543661..544089 | + | 429 | Protein_454 | IS110 family transposase | - |
| BPS_RS20885 (BPSS0402B) | 544316..544432 | - | 117 | Protein_455 | IS3 family transposase ISBcen15 | Transposase |
| BPS_RS20890 (BPSS0403) | 544679..546139 | + | 1461 | WP_011205401.1 | metallophosphoesterase | - |
| BPS_RS20895 (BPSS0404) | 546298..547560 | + | 1263 | WP_045606182.1 | c-type cytochrome | - |
| BPS_RS20900 (BPSS0405) | 547717..548649 | + | 933 | WP_011205403.1 | glycerophosphoryl diester phosphodiesterase | - |
| BPS_RS20905 (BPSS0406) | 548847..549040 | + | 194 | Protein_459 | IS21 family transposase | - |
| BPS_RS20915 (BPSS0407) | 549102..549788 | + | 687 | Protein_460 | IS3 family transposase | - |
| BPS_RS20920 (BPSS0408) | 549815..550549 | - | 735 | WP_004525427.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Burkholderia pseudomallei B03 | Prophage | TA48466, TA48467 | NZ_CP009150 | 385433..415372 | 0.004 | |
| Burkholderia pseudomallei A79A | Prophage | TA48503, TA48504 | NZ_CP009164 | 1605968..1639550 | 0.007 | |
| Burkholderia pseudomallei K96243 | Prophage | TA49223, TA49224 | NZ_CP009537 | 2313777..2343096 | 0 | |
| Burkholderia pseudomallei strain 2013746811 | Prophage | TA69904, TA69905 | NZ_CP018401 | 1568500..1601453 | 0.004 | |
| Burkholderia pseudomallei strain FDAARGOS_592 | Prophage | TA114077, TA114078 | NZ_CP033706 | 1546940..1580279 | 0.004 | |
| Burkholderia pseudomallei strain B03 | Prophage | TA144545, TA144546 | NZ_CP046583 | 3197583..3231163 | 0.007 |