MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34345 bp
Accession: JN194214 Location: 1..34345 Organism: Escherichia coli strain JIE143 transconjugant Tx143 Replicon: plasmid pJIE143
Accession: JN194214 Location: 1..34345 Organism: Escherichia coli strain JIE143 transconjugant Tx143 Replicon: plasmid pJIE143
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_0 | 967..1839 | + | 873 | AEQ61755.1 | pi replication initiation protein | - |
| Locus_1 | 1852..1861 | + | 10 | AEQ61776.1 | conserved hypothetical protein | - |
| Locus_2 | 2048..3310 | + | 1263 | AEQ61794.1 | IS1380 family transposase ISEcp1 | Transposase |
| Locus_3 | 3566..4441 | + | 876 | AEQ61756.1 | Beta-lactamase CTX-M-1 | ARG |
| Locus_4 | 4838..5232 | + | 395 | AEQ61796.1 | conserved hypothetical protein | - |
| Locus_5 | 5367..5894 | + | 528 | AEQ61777.1 | conserved hypothetical protein | - |
| Locus_6 | 7161..7820 | - | 660 | AEQ61774.1 | hypothetical protein | VF |
| Locus_7 | 7925..8665 | - | 741 | AEQ61775.1 | Tyrosine recombinase XerC | VF |
| Locus_8 | 8791..9222 | - | 432 | AEQ61785.1 | conserved hypothetical protein | - |
| Locus_9 | 9310..9966 | - | 657 | AEQ61784.1 | conserved hypothetical protein | - |
| Locus_10 | 10070..10534 | - | 465 | AEQ61757.1 | histone-like nucleoid-structuring protein | - |
| Locus_11 | 10552..10758 | - | 207 | AEQ61778.1 | Hha | - |
| Locus_12 | 10755..12908 | - | 2154 | AEQ61768.1 | DNA topoisomerase 3 | - |
| Locus_13 | 13613..14125 | - | 513 | AEQ61779.1 | putative Par-like protein | - |
| Locus_14 | 14104..14412 | - | 309 | AEQ61780.1 | conserved hypothetical protein | - |
| Locus_15 | 14515..14769 | - | 255 | AEQ61795.1 | conserved hypothetical protein | - |
| Locus_16 | 14775..15080 | - | 306 | AEQ61769.1 | putative conjugal transfer protein TrbM | - |
| Locus_17 | 15495..17357 | - | 1863 | AEQ61758.1 | TaxB | - |
| Locus_18 | 17344..18372 | - | 1029 | AEQ61759.1 | Type IV secretion system protein VirB11 | VF |
| Locus_19 | 18374..19492 | - | 1119 | AEQ61760.1 | hypothetical protein | VF |
| Locus_20 | 19485..20393 | - | 909 | AEQ61761.1 | Type IV secretion system protein virB9 | VF |
| Locus_21 | 20390..21076 | - | 687 | AEQ61762.1 | Type IV secretion system protein virB8 | VF |
| Locus_22 | 21069..21197 | - | 129 | AEQ61781.1 | Pilx7 | - |
| Locus_23 | 21591..22685 | - | 1095 | AEQ61763.1 | Pilx6 | - |
| Locus_24 | 22697..23413 | - | 717 | AEQ61764.1 | Pilx5 | - |
| Locus_25 | 23425..26172 | - | 2748 | AEQ61765.1 | Type IV secretion system protein virB4 | VF |
| Locus_26 | 26191..26517 | - | 327 | AEQ61766.1 | hypothetical protein | VF |
| Locus_27 | 26531..27151 | - | 621 | AEQ61767.1 | hypothetical protein | VF |
| Locus_28 | 27154..27330 | - | 177 | AEQ61792.1 | conserved hypothetical protein | - |
| Locus_29 | 27509..27724 | - | 216 | AEQ61782.1 | putative Eex entry exclusion protein | - |
| Locus_30 | 27721..28014 | - | 294 | AEQ61793.1 | conserved hypothetical protein | - |
| Locus_31 | 28091..29320 | - | 1230 | AEQ61771.1 | hypothetical protein | Relaxase |
| Locus_32 | 29324..29827 | - | 504 | AEQ61783.1 | TaxA | - |
| Locus_33 | 30188..30535 | - | 348 | AEQ61773.1 | putative HicB toxin-antitoxin system protein | Antitoxin Detail |
| Locus_34 | 30532..30780 | - | 249 | AEQ61772.1 | putative HicA toxin-antitoxin system protein | Toxin Detail |
| Locus_35 | 31085..31450 | - | 366 | AEQ61791.1 | conserved hypothetical protein | - |
| Locus_36 | 31526..31867 | - | 342 | AEQ61790.1 | conserved hypothetical protein | - |
| Locus_37 | 31827..32186 | - | 360 | AEQ61789.1 | conserved hypothetical protein | - |
| Locus_38 | 32279..32506 | - | 228 | AEQ61788.1 | conserved hypothetical protein | Antitoxin Detail |
| Locus_39 | 32493..32744 | - | 252 | AEQ61787.1 | conserved hypothetical protein | Toxin Detail |
| Locus_40 | 32741..33283 | - | 543 | AEQ61786.1 | conserved hypothetical protein | - |
| Locus_41 | 33388..34266 | - | 879 | AEQ61770.1 | DnaJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain AR_0114 | Non-Mobilizable plasmid | TA77226, TA77227 | NZ_CP021735 | 1..31765 | 0.004 | |
| Escherichia coli strain 1283 | Non-Mobilizable plasmid | TA81023 | NZ_CP023373 | 1..31364 | 0.002 | |
| Escherichia coli strain CFS3313 | Non-Mobilizable plasmid | TA96772 | NZ_CP026942 | 1..31764 | 0.004 | |
| Escherichia coli strain FDAARGOS_497 | Non-Mobilizable plasmid | TA114486, TA114487 | NZ_CP033849 | 1..32101 | 0.006 | |
| Escherichia coli strain 10 | Non-Mobilizable plasmid | TA149102 | NZ_CP048333 | 1..32102 | 0.004 | |
| Escherichia coli strain EC45 | Non-Mobilizable plasmid | TA168329, TA168330 | NZ_CP059127 | 1..32524 | 0.008 | |
| Escherichia coli strain SCAID WND2-2021 (3/145) | Non-Mobilizable plasmid | TA215301, TA215302 | NZ_CP082830 | 1..32040 | 0.005 | |
| Escherichia coli isolate 131 | Non-Mobilizable plasmid | TA296535, TA296536 | NZ_OX030705 | 1..31765 | 0.004 |