Pectobacterium brasiliense
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS01170 | i1 | Pectobacterium brasiliense 1692 | chromosome (NZ_CP047495) | 2749401..2774372 | anti-bacterial; anti-eukaryotic |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0321 |
GT391_RS06470 (expR1) | T6SS01170 |
protein | QS regulatory pathway | Pectobacterium brasiliense strain 1692 | chromosome (NZ_CP047495) | 1453704..1455596 (+) | 746272689 | T6SS transcripts (↓) |
| REG0322 |
GT391_RS06405 (expI) | T6SS01170 |
protein | QS regulatory pathway | Pectobacterium brasiliense strain 1692 | chromosome (NZ_CP047495) | 1436931..1437581 (-) | 497970044 | GT391_RS06470 (expR1) (↓) |
| REG0323 |
GT391_RS16925 (phoP) | T6SS01170 |
protein | TCS-HK | Pectobacterium brasiliense strain 1692 | chromosome (NZ_CP047495) | 3795787..3796476 (-) | 497961604 | GT391_RS06470 (expR1) (↑) |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|---|---|---|---|---|---|---|---|
| EFF01835 |
GT391_RS21640 (AHH) | Tde | - | T6SS01170 |
Pectobacterium brasiliense strain 1692 | chromosome (NZ_CP047495) | 1694162..1694776 (-) | 1194668254 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
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Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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