Vibrio parahaemolyticus BB22OP
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS00719 | i1 | Vibrio parahaemolyticus BB22OP | chromosome I (NC_019955) | 1464178..1493343 | anti-bacterial |
| T6SS00720 | i5 | Vibrio parahaemolyticus BB22OP | chromosome II (NC_019971) | 1048650..1070709 | anti-bacterial |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0329 |
VPBB_RS05425 (H-NS) | T6SS00719 |
protein | Transcription regulator | Vibrio parahaemolyticus BB22OP | chromosome (NC_019955) | 1170475..1170882 (-) | 505109423 | VgrG1 expression and secretion (↑) |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|---|---|---|---|---|---|---|---|
| EFF01832 |
VPBB_RS15030 (Tme1) | Tme | IMU00352 |
T6SS00719 |
Vibrio parahaemolyticus BB22OP | chromosome (NC_019955) | 3247654..3248586 (+) | 505110423 |
| EFF01830 |
VPBB_RS06670 (VgrG1) | - | - | T6SS00719 |
Vibrio parahaemolyticus BB22OP | chromosome (NC_019955) | 1467896..1469974 (+) | 505109564 |
| EFF01831 |
VPBB_RS19920 (Hcp2) | - | - | T6SS00720 |
Vibrio parahaemolyticus BB22OP | chromosome (NC_019971) | 1050543..1051022 (-) | 491518336 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| IMU00352 |
VPBB_RS15035 (Tmi1) | T6SS00719 |
Vibrio parahaemolyticus BB22OP | chromosome (NC_019955) | 3248576..3249004 (+) | 491520929 | EFF01830 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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