Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | ABC814_RS10295 | Genome accession | NZ_CP155533 |
| Coordinates | 1978511..1978834 (-) | Length | 107 a.a. |
| NCBI ID | WP_000738628.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain Spn1439-106 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1973511..1983834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC814_RS10260 (ABC814_10260) | comYH | 1973651..1974604 (-) | 954 | WP_000345132.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABC814_RS10265 (ABC814_10265) | - | 1974950..1975752 (+) | 803 | Protein_1998 | IS5 family transposase | - |
| ABC814_RS10270 (ABC814_10270) | - | 1975903..1976379 (+) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| ABC814_RS10275 (ABC814_10275) | comGG/cglG | 1977034..1977447 (-) | 414 | WP_000265615.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABC814_RS10280 (ABC814_10280) | comGF/cglF | 1977425..1977886 (-) | 462 | WP_000250520.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABC814_RS10285 (ABC814_10285) | comGE/cglE | 1977849..1978151 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABC814_RS10290 (ABC814_10290) | comGD/cglD | 1978114..1978548 (-) | 435 | WP_033606693.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABC814_RS10295 (ABC814_10295) | comGC/cglC | 1978511..1978834 (-) | 324 | WP_000738628.1 | comG operon protein ComGC | Machinery gene |
| ABC814_RS10300 (ABC814_10300) | comGB/cglB | 1978836..1979852 (-) | 1017 | WP_078141518.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABC814_RS10305 (ABC814_10305) | comGA/cglA/cilD | 1979800..1980741 (-) | 942 | WP_000249572.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABC814_RS10310 (ABC814_10310) | - | 1980817..1981182 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ABC814_RS10315 (ABC814_10315) | - | 1981333..1982391 (-) | 1059 | WP_000649465.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| ABC814_RS10320 (ABC814_10320) | nagA | 1982554..1983705 (-) | 1152 | WP_001134457.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12232.41 Da Isoelectric Point: 9.8887
>NTDB_id=997203 ABC814_RS10295 WP_000738628.1 1978511..1978834(-) (comGC/cglC) [Streptococcus pneumoniae strain Spn1439-106]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLRKLQD
DGRITEEQAKAYKEYHDKQNTSQIVKD
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLRKLQD
DGRITEEQAKAYKEYHDKQNTSQIVKD
Nucleotide
Download Length: 324 bp
>NTDB_id=997203 ABC814_RS10295 WP_000738628.1 1978511..1978834(-) (comGC/cglC) [Streptococcus pneumoniae strain Spn1439-106]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAAATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGAAAGTTACAAGAC
GATGGACGCATCACGGAAGAACAGGCTAAAGCCTATAAAGAATACCATGATAAACAAAATACTAGTCAAATCGTTAAAGA
TTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAAATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGAAAGTTACAAGAC
GATGGACGCATCACGGAAGAACAGGCTAAAGCCTATAAAGAATACCATGATAAACAAAATACTAGTCAAATCGTTAAAGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
93.458 |
100 |
0.935 |
| comGC/cglC | Streptococcus pneumoniae D39 |
94.175 |
96.262 |
0.907 |
| comGC/cglC | Streptococcus pneumoniae R6 |
94.175 |
96.262 |
0.907 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
94.175 |
96.262 |
0.907 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
93.204 |
96.262 |
0.897 |
| comGC/cglC | Streptococcus mitis SK321 |
88.35 |
96.262 |
0.85 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
69.388 |
91.589 |
0.636 |
| comYC | Streptococcus mutans UA140 |
64.211 |
88.785 |
0.57 |
| comYC | Streptococcus mutans UA159 |
64.211 |
88.785 |
0.57 |
| comYC | Streptococcus suis isolate S10 |
69.136 |
75.701 |
0.523 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.639 |
90.654 |
0.495 |
| comGC | Staphylococcus aureus MW2 |
48.837 |
80.374 |
0.393 |
| comGC | Staphylococcus aureus N315 |
48.837 |
80.374 |
0.393 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
45.349 |
80.374 |
0.364 |