Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ELZ49_RS06110 Genome accession   NZ_LR134086
Coordinates   1233341..1234627 (+) Length   428 a.a.
NCBI ID   WP_000121118.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC13142     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1228341..1239627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ49_RS06080 - 1228737..1228850 (+) 114 WP_001789890.1 hypothetical protein -
  ELZ49_RS06085 (NCTC13142_01167) tsf 1228885..1229765 (+) 881 Protein_1149 translation elongation factor Ts -
  ELZ49_RS06090 (NCTC13142_01168) pyrH 1229902..1230624 (+) 723 WP_000057330.1 UMP kinase -
  ELZ49_RS06095 (NCTC13142_01169) frr 1230643..1231197 (+) 555 WP_001280005.1 ribosome recycling factor -
  ELZ49_RS06100 (NCTC13142_01170) - 1231570..1232340 (+) 771 WP_000473699.1 isoprenyl transferase -
  ELZ49_RS06105 (NCTC13142_01171) - 1232347..1233129 (+) 783 WP_000868412.1 phosphatidate cytidylyltransferase -
  ELZ49_RS06110 (NCTC13142_01172) eeP 1233341..1234627 (+) 1287 WP_000121118.1 RIP metalloprotease RseP Regulator
  ELZ49_RS06115 - 1234647..1236349 (+) 1703 Protein_1155 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48134.53 Da        Isoelectric Point: 9.5403

>NTDB_id=997203 ELZ49_RS06110 WP_000121118.1 1233341..1234627(+) (eeP) [Staphylococcus aureus strain NCTC13142]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=997203 ELZ49_RS06110 WP_000121118.1 1233341..1234627(+) (eeP) [Staphylococcus aureus strain NCTC13142]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCAC
AACAAGCAGGATTACAAAAAGGTGATAAAATTGTTCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACGAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTTAAACCAATTGTATTCGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395


Multiple sequence alignment