Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AADP84_RS06165 | Genome accession | NZ_CP151186 |
| Coordinates | 1249992..1250303 (+) | Length | 103 a.a. |
| NCBI ID | WP_000921699.1 | Uniprot ID | A0A7U7JUV8 |
| Organism | Staphylococcus argenteus strain Dubai-25 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1244992..1255303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AADP84_RS06135 (AADP84_06135) | - | 1245774..1245974 (+) | 201 | WP_000087563.1 | YqgQ family protein | - |
| AADP84_RS06140 (AADP84_06140) | - | 1245974..1246960 (+) | 987 | WP_000161316.1 | ROK family glucokinase | - |
| AADP84_RS06145 (AADP84_06145) | - | 1246960..1247289 (+) | 330 | WP_001018874.1 | MTH1187 family thiamine-binding protein | - |
| AADP84_RS06150 (AADP84_06150) | - | 1247286..1247909 (+) | 624 | WP_031787263.1 | MBL fold metallo-hydrolase | - |
| AADP84_RS06155 (AADP84_06155) | comGA | 1247961..1248935 (+) | 975 | WP_031787262.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AADP84_RS06160 (AADP84_06160) | comGB | 1248907..1249977 (+) | 1071 | WP_031787261.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AADP84_RS06165 (AADP84_06165) | comGC | 1249992..1250303 (+) | 312 | WP_000921699.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AADP84_RS06170 (AADP84_06170) | comGD | 1250281..1250727 (+) | 447 | WP_072324131.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AADP84_RS06175 (AADP84_06175) | comGE | 1250714..1251013 (+) | 300 | WP_031787259.1 | hypothetical protein | Machinery gene |
| AADP84_RS06180 (AADP84_06180) | comGF | 1250973..1251428 (+) | 456 | WP_078097699.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AADP84_RS06185 (AADP84_06185) | - | 1251527..1251676 (+) | 150 | WP_072324192.1 | hypothetical protein | - |
| AADP84_RS06190 (AADP84_06190) | - | 1251663..1252187 (+) | 525 | WP_031787256.1 | shikimate kinase | - |
| AADP84_RS06195 (AADP84_06195) | gcvT | 1252344..1253435 (+) | 1092 | WP_000093342.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AADP84_RS06200 (AADP84_06200) | gcvPA | 1253454..1254800 (+) | 1347 | WP_031787255.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11189.29 Da Isoelectric Point: 9.1992
>NTDB_id=975755 AADP84_RS06165 WP_000921699.1 1249992..1250303(+) (comGC) [Staphylococcus argenteus strain Dubai-25]
MLKVIKKAKAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIDELVADGFI
KEAQKTCKSGETISISNGEAIAN
MLKVIKKAKAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIDELVADGFI
KEAQKTCKSGETISISNGEAIAN
Nucleotide
Download Length: 312 bp
>NTDB_id=975755 AADP84_RS06165 WP_000921699.1 1249992..1250303(+) (comGC) [Staphylococcus argenteus strain Dubai-25]
ATGTTGAAAGTTATTAAAAAAGCTAAAGCATTTACTTTAATAGAAATGCTATTAGTTCTATTAATTATAAGCTTATTATT
AATTTTAATTATTCCAAATATCGCGAAACAAACAGCGCATATCCAATCTACTGGATGTAATGCACAAGTTAAAATGGTTA
ATAGTCAAATTGAAGCTTATGCATTGAAACACAATAGAAATCCTTCTTCAATTGATGAACTAGTAGCTGATGGCTTTATT
AAAGAGGCACAAAAAACATGTAAATCTGGTGAAACAATATCGATTAGTAATGGAGAAGCTATTGCAAATTAG
ATGTTGAAAGTTATTAAAAAAGCTAAAGCATTTACTTTAATAGAAATGCTATTAGTTCTATTAATTATAAGCTTATTATT
AATTTTAATTATTCCAAATATCGCGAAACAAACAGCGCATATCCAATCTACTGGATGTAATGCACAAGTTAAAATGGTTA
ATAGTCAAATTGAAGCTTATGCATTGAAACACAATAGAAATCCTTCTTCAATTGATGAACTAGTAGCTGATGGCTTTATT
AAAGAGGCACAAAAAACATGTAAATCTGGTGAAACAATATCGATTAGTAATGGAGAAGCTATTGCAAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
90.291 |
100 |
0.903 |
| comGC | Staphylococcus aureus N315 |
90.291 |
100 |
0.903 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
43.878 |
95.146 |
0.417 |
| comYC | Streptococcus mutans UA159 |
48.235 |
82.524 |
0.398 |
| comYC | Streptococcus mutans UA140 |
48.235 |
82.524 |
0.398 |
| comYC | Streptococcus suis isolate S10 |
51.282 |
75.728 |
0.388 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
48.78 |
79.612 |
0.388 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |