Detailed information NTG0940210

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: V6T01_RS09515
• Genome accession: NZ_CP145856
• Coordinates: 2032040..2032366 (-)
• Length: 108 a.a.
• NCBI ID: WP_410541296.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2027040..2037366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6T01_RS09475 (V6T01_09450)	-	2027304..2027960 (-)	657	WP_410541297.1	CPBP family intramembrane glutamic endopeptidase	-
V6T01_RS09480 (V6T01_09455)	-	2027972..2028169 (-)	198	WP_002885716.1	helix-turn-helix transcriptional regulator	-
V6T01_RS09485 (V6T01_09460)	-	2028420..2029613 (-)	1194	WP_003095894.1	acetate kinase	-
V6T01_RS09490 (V6T01_09465)	comYH	2029670..2030626 (-)	957	WP_155222522.1	class I SAM-dependent methyltransferase	Machinery gene
V6T01_RS09495 (V6T01_09470)	comGG	2030671..2030988 (-)	318	WP_155222523.1	competence type IV pilus minor pilin ComGG	-
V6T01_RS09500 (V6T01_09475)	comYF	2030966..2031403 (-)	438	WP_037600123.1	competence type IV pilus minor pilin ComGF	Machinery gene
V6T01_RS09505 (V6T01_09480)	comGE	2031390..2031680 (-)	291	WP_073689936.1	competence type IV pilus minor pilin ComGE	-
V6T01_RS09510 (V6T01_09485)	comYD	2031652..2032080 (-)	429	WP_253183867.1	competence type IV pilus minor pilin ComGD	Machinery gene
V6T01_RS09515 (V6T01_09490)	comYC	2032040..2032366 (-)	327	WP_410541296.1	competence type IV pilus major pilin ComGC	Machinery gene
V6T01_RS09520 (V6T01_09495)	comYB	2032363..2033463 (-)	1101	WP_410531677.1	competence type IV pilus assembly protein ComGB	Machinery gene
V6T01_RS09525 (V6T01_09500)	comYA	2033345..2034286 (-)	942	WP_410541295.1	competence type IV pilus ATPase ComGA	Machinery gene
V6T01_RS09530 (V6T01_09505)	-	2034367..2034729 (-)	363	WP_002887019.1	DUF1033 family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 11902.00 Da
• Isoelectric Point: 9.9219

>NTDB_id=940210 V6T01_RS09515 WP_410541296.1 2032040..2032366(-) (comYC) [Streptococcus salivarius strain KSS1]
MKMMLKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKAASLAALVS
EGQITQKQADSYNDYYAKHGGESRSVAN

Nucleotide

• Length: 327 bp

>NTDB_id=940210 V6T01_RS09515 WP_410541296.1 2032040..2032366(-) (comYC) [Streptococcus salivarius strain KSS1]
ATGAAAATGATGTTAAAAAAATTGAATGCCGTTAAACTACGAGCTTTTACGCTAATTGAAATGCTAGTCGTGCTTCTCAT
TATCAGTATTCTCCTCTTGCTTTTTGTTCCTAACTTGAGTAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCAGCTG
TGGTCAAGGTCGTGGATTCTCAAGCAGAACTTTATGAAATGAAGAATAACAAGGCAGCTAGCTTAGCAGCTCTTGTTTCA
GAAGGTCAAATCACGCAAAAACAGGCAGATTCATACAATGATTATTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGC
CAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	69.231	96.296	0.667
comYC	Streptococcus mutans UA159	69.231	96.296	0.667
comYC	Streptococcus gordonii str. Challis substr. CH1	63.81	97.222	0.62
comGC/cglC	Streptococcus mitis SK321	62.264	98.148	0.611
comGC/cglC	Streptococcus mitis NCTC 12261	58.333	100	0.583
comGC/cglC	Streptococcus pneumoniae D39	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae R6	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae Rx1	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae TIGR4	58.491	98.148	0.574
comGC	Lactococcus lactis subsp. cremoris KW2	56.604	98.148	0.556
comYC	Streptococcus suis isolate S10	60.227	81.481	0.491
comGC	Staphylococcus aureus MW2	50	72.222	0.361
comGC	Staphylococcus aureus N315	50	72.222	0.361