Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LDN16_RS09165 | Genome accession | NZ_AP024961 |
| Coordinates | 2051916..2052329 (-) | Length | 137 a.a. |
| NCBI ID | WP_027227779.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain 80-045 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2046916..2057329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN16_RS09155 (LEG80045_17760) | letS | 2047846..2050578 (+) | 2733 | WP_027264732.1 | two-component system sensor histidine kinase LetS | Regulator |
| LDN16_RS09160 (LEG80045_17770) | - | 2050675..2051919 (+) | 1245 | WP_011215875.1 | 6-phosphofructokinase | - |
| LDN16_RS09165 (LEG80045_17780) | pilA2 | 2051916..2052329 (-) | 414 | WP_027227779.1 | pilin | Machinery gene |
| LDN16_RS09170 (LEG80045_17790) | pilA2 | 2052526..2052936 (-) | 411 | WP_027227778.1 | pilin | Machinery gene |
| LDN16_RS09175 (LEG80045_17800) | - | 2053238..2053555 (+) | 318 | WP_027264733.1 | BolA family transcriptional regulator | - |
| LDN16_RS09180 (LEG80045_17810) | - | 2053630..2055051 (+) | 1422 | WP_027264734.1 | APC family permease | - |
| LDN16_RS09185 (LEG80045_17820) | - | 2055181..2056611 (-) | 1431 | WP_027264735.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14448.79 Da Isoelectric Point: 6.2016
>NTDB_id=89667 LDN16_RS09165 WP_027227779.1 2051916..2052329(-) (pilA2) [Legionella pneumophila strain 80-045]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMTSAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMTSAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=89667 LDN16_RS09165 WP_027227779.1 2051916..2052329(-) (pilA2) [Legionella pneumophila strain 80-045]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCAAGAGTGGTCGAAGGCTTGGAAATGACTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAATACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCAAGAGTGGTCGAAGGCTTGGAAATGACTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAATACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.341 |
100 |
0.555 |
| comP | Acinetobacter baylyi ADP1 |
46.897 |
100 |
0.496 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.5 |
100 |
0.416 |
| pilE | Neisseria gonorrhoeae MS11 |
36.538 |
100 |
0.416 |
| pilA | Haemophilus influenzae Rd KW20 |
39.716 |
100 |
0.409 |
| pilA | Vibrio cholerae C6706 |
36 |
100 |
0.394 |
| pilA | Vibrio cholerae strain A1552 |
36 |
100 |
0.394 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36 |
100 |
0.394 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |