Detailed information NTG0088037

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: OCX20_RS08075
• Genome accession: NZ_AP024738
• Coordinates: 1653979..1654290 (-)
• Length: 103 a.a.
• NCBI ID: WP_261921278.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 59731
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1648979..1659290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCX20_RS08040	gcvPA	1649481..1650827 (-)	1347	WP_117200971.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
OCX20_RS08045	gcvT	1650847..1651938 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
OCX20_RS08050	-	1652097..1652621 (-)	525	WP_001015121.1	shikimate kinase	-
OCX20_RS08055	-	1652611..1652757 (-)	147	WP_001789879.1	hypothetical protein	-
OCX20_RS08060	comGF	1652854..1653351 (-)	498	WP_001789864.1	competence type IV pilus minor pilin ComGF	Machinery gene
OCX20_RS08065	comGE	1653269..1653568 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
OCX20_RS08070	comGD	1653555..1654001 (-)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
OCX20_RS08075	comGC	1653979..1654290 (-)	312	WP_261921278.1	competence type IV pilus major pilin ComGC	Machinery gene
OCX20_RS08080	comGB	1654304..1655374 (-)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
OCX20_RS08085	comGA	1655346..1656320 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
OCX20_RS08090	-	1656372..1656995 (-)	624	WP_001223010.1	MBL fold metallo-hydrolase	-
OCX20_RS08095	-	1656992..1657321 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
OCX20_RS08100	-	1657321..1658307 (-)	987	WP_000161314.1	ROK family glucokinase	-
OCX20_RS08105	-	1658304..1658507 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11349.37 Da
• Isoelectric Point: 8.5268

>NTDB_id=88037 OCX20_RS08075 WP_261921278.1 1653979..1654290(-) (comGC) [Staphylococcus aureus strain 59731]
MFKFLKKTQAFTLIEMLLVLLIISLLLFLIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=88037 OCX20_RS08075 WP_261921278.1 1653979..1654290(-) (comGC) [Staphylococcus aureus strain 59731]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
ATTTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369