Detailed information NTG0874509

Bioinformatically predicted

Overview

• Name: comX/sigX/comX1/sigX1
• Type: Regulator
• Locus tag: RDV54_RS07175
• Genome accession: NZ_CP133471
• Coordinates: 1509298..1509777 (+)
• Length: 159 a.a.
• NCBI ID: WP_000471939.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain LMG 14557
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1504298..1514777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV54_RS07160 (RDV54_07160)	tilS	1505379..1506656 (+)	1278	WP_001209052.1	tRNA lysidine(34) synthetase TilS	-
RDV54_RS07165 (RDV54_07165)	hpt	1506661..1507203 (+)	543	WP_000892173.1	hypoxanthine phosphoribosyltransferase	-
RDV54_RS07170 (RDV54_07170)	ftsH	1507219..1509177 (+)	1959	WP_000744563.1	ATP-dependent zinc metalloprotease FtsH	-
RDV54_RS07175 (RDV54_07175)	comX/sigX/comX1/sigX1	1509298..1509777 (+)	480	WP_000471939.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 20031.74 Da
• Isoelectric Point: 7.4730

>NTDB_id=874509 RDV54_RS07175 WP_000471939.1 1509298..1509777(+) (comX/sigX/comX1/sigX1) [Streptococcus mitis strain LMG 14557]
MFKELYEEVQGIVYKCRNEYHLHLWELSDWDQEGMICLHELISREEGIVEDIPRLRKYFKTKFRNRILDYIRKQESQKRR
YDKEPYEEVGEISHRISEGGMWLDEYYLFHETLRDYRNKQSKDKQEELERVLRHERFRGRQRVLRDLRIVFKEFDIRTH

Nucleotide

• Length: 480 bp

>NTDB_id=874509 RDV54_RS07175 WP_000471939.1 1509298..1509777(+) (comX/sigX/comX1/sigX1) [Streptococcus mitis strain LMG 14557]
ATGTTTAAAGAATTATATGAAGAAGTCCAGGGGATTGTATATAAGTGTAGAAATGAATATCATCTCCATTTATGGGAGCT
ATCAGATTGGGACCAAGAGGGAATGATTTGCTTACATGAATTGATTAGTAGAGAAGAAGGAATAGTAGAAGATATCCCAC
GCTTACGTAAATACTTCAAAACTAAATTCCGTAATCGGATCCTAGACTATATCCGTAAGCAGGAAAGCCAGAAGCGTAGA
TATGATAAAGAACCCTATGAAGAAGTAGGTGAGATTAGTCATCGTATCAGTGAGGGAGGTATGTGGCTAGATGAGTATTA
TCTCTTTCATGAGACACTAAGAGATTATAGAAACAAACAAAGTAAAGACAAACAAGAAGAGTTAGAACGCGTCTTAAGAC
ATGAACGCTTCCGAGGGCGTCAAAGAGTATTGAGAGACTTACGTATTGTGTTTAAGGAGTTTGATATCCGTACTCATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	100	100	1
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	97.484	100	0.975
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	93.082	100	0.931
comX/comX2	Streptococcus pneumoniae D39	92.453	100	0.925
comX/comX1	Streptococcus pneumoniae D39	92.453	100	0.925
comX/comX1	Streptococcus pneumoniae R6	92.453	100	0.925
comX/comX2	Streptococcus pneumoniae R6	92.453	100	0.925
comX/comX2	Streptococcus pneumoniae Rx1	92.453	100	0.925
comX/comX1	Streptococcus pneumoniae Rx1	92.453	100	0.925
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	93.038	99.371	0.925
comX/comX1	Streptococcus pneumoniae TIGR4	91.824	100	0.918
comX/comX2	Streptococcus pneumoniae TIGR4	91.824	100	0.918
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.077	98.113	0.472
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.077	98.113	0.472
comX/sigX	Streptococcus mutans UA159	46.405	96.226	0.447
comX/sigX	Streptococcus suis isolate S10	44.444	96.226	0.428
comX/sigX	Streptococcus suis D9	44.444	96.226	0.428
comX/sigX	Streptococcus suis P1/7	44.444	96.226	0.428
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.474	95.597	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.474	95.597	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40.268	93.711	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40.268	93.711	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40.268	93.711	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40.268	93.711	0.377