Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | P8191_RS00230 | Genome accession | NZ_CP121250 |
| Coordinates | 41963..42388 (+) | Length | 141 a.a. |
| NCBI ID | WP_011285575.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain 1044 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 36963..47388
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8191_RS00180 (P8191_00180) | - | 37392..37655 (+) | 264 | WP_029714276.1 | hypothetical protein | - |
| P8191_RS00185 (P8191_00185) | - | 37692..37988 (+) | 297 | WP_011054584.1 | MerR family transcriptional regulator | - |
| P8191_RS00190 (P8191_00190) | - | 37985..38119 (+) | 135 | WP_002995985.1 | hypothetical protein | - |
| P8191_RS00195 (P8191_00195) | - | 38135..38449 (+) | 315 | WP_023610888.1 | helix-turn-helix transcriptional regulator | - |
| P8191_RS00200 (P8191_00200) | - | 38463..39293 (+) | 831 | WP_009881060.1 | phage replisome organizer N-terminal domain-containing protein | - |
| P8191_RS00205 (P8191_00205) | - | 39280..40062 (+) | 783 | WP_011285581.1 | ATP-binding protein | - |
| P8191_RS00210 (P8191_00210) | - | 40203..40556 (+) | 354 | WP_011285579.1 | hypothetical protein | - |
| P8191_RS00215 (P8191_00215) | - | 40537..40791 (+) | 255 | WP_011018143.1 | hypothetical protein | - |
| P8191_RS00220 (P8191_00220) | - | 40813..41295 (+) | 483 | WP_011018142.1 | siphovirus Gp157 family protein | - |
| P8191_RS00225 (P8191_00225) | - | 41296..41970 (+) | 675 | WP_046735269.1 | ERF family protein | - |
| P8191_RS00230 (P8191_00230) | ssb | 41963..42388 (+) | 426 | WP_011285575.1 | single-stranded DNA-binding protein | Machinery gene |
| P8191_RS00235 (P8191_00235) | - | 42394..42597 (+) | 204 | WP_011106686.1 | hypothetical protein | - |
| P8191_RS00240 (P8191_00240) | - | 42597..43037 (+) | 441 | WP_011285574.1 | RusA family crossover junction endodeoxyribonuclease | - |
| P8191_RS00245 (P8191_00245) | - | 43034..43390 (+) | 357 | WP_011284873.1 | hypothetical protein | - |
| P8191_RS10350 | - | 43387..43632 (+) | 246 | WP_011285573.1 | hypothetical protein | - |
| P8191_RS00250 (P8191_00250) | - | 43632..43868 (+) | 237 | WP_002995955.1 | DUF3310 domain-containing protein | - |
| P8191_RS00255 (P8191_00255) | - | 43865..44035 (+) | 171 | WP_002995952.1 | hypothetical protein | - |
| P8191_RS00260 (P8191_00260) | - | 44032..44316 (+) | 285 | WP_011018134.1 | hypothetical protein | - |
| P8191_RS00265 (P8191_00265) | - | 44318..44950 (+) | 633 | WP_011888685.1 | N-6 DNA methylase | - |
| P8191_RS00270 (P8191_00270) | - | 44955..45434 (+) | 480 | WP_011888686.1 | DUF1642 domain-containing protein | - |
| P8191_RS00275 (P8191_00275) | - | 45431..45601 (+) | 171 | WP_002987493.1 | hypothetical protein | - |
| P8191_RS00280 (P8191_00280) | - | 45885..46319 (+) | 435 | WP_011888687.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15995.63 Da Isoelectric Point: 4.5748
>NTDB_id=811310 P8191_RS00230 WP_011285575.1 41963..42388(+) (ssb) [Streptococcus pyogenes strain 1044]
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=811310 P8191_RS00230 WP_011285575.1 41963..42388(+) (ssb) [Streptococcus pyogenes strain 1044]
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.294 |
100 |
0.667 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.07 |
100 |
0.66 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.262 |
100 |
0.433 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.262 |
100 |
0.433 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.786 |
79.433 |
0.411 |
| ssbA | Streptococcus mutans UA159 |
40.426 |
100 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
29.379 |
100 |
0.369 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
49.524 |
74.468 |
0.369 |