Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | P3T89_RS07120 | Genome accession | NZ_CP120166 |
| Coordinates | 1397186..1397929 (+) | Length | 247 a.a. |
| NCBI ID | WP_323704906.1 | Uniprot ID | - |
| Organism | Mammaliicoccus sciuri strain Dog024_1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1392186..1402929
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3T89_RS07080 (P3T89_07080) | - | 1392270..1392824 (+) | 555 | WP_058611616.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| P3T89_RS07085 (P3T89_07085) | - | 1392825..1394273 (+) | 1449 | WP_058611615.1 | rhomboid family protein | - |
| P3T89_RS07090 (P3T89_07090) | - | 1394278..1394469 (+) | 192 | WP_078099923.1 | YqgQ family protein | - |
| P3T89_RS07095 (P3T89_07095) | - | 1394466..1395437 (+) | 972 | WP_025904167.1 | ROK family glucokinase | - |
| P3T89_RS07100 (P3T89_07100) | - | 1395437..1395751 (+) | 315 | WP_058611614.1 | MTH1187 family thiamine-binding protein | - |
| P3T89_RS07105 (P3T89_07105) | - | 1395781..1396020 (-) | 240 | WP_016911885.1 | DUF2759 domain-containing protein | - |
| P3T89_RS07110 (P3T89_07110) | - | 1396118..1396750 (+) | 633 | WP_058611613.1 | MBL fold metallo-hydrolase | - |
| P3T89_RS07115 (P3T89_07115) | - | 1396784..1397032 (-) | 249 | WP_025904960.1 | DUF2626 family protein | - |
| P3T89_RS07120 (P3T89_07120) | comGA | 1397186..1397929 (+) | 744 | WP_323704906.1 | ATPase, T2SS/T4P/T4SS family | Machinery gene |
| P3T89_RS07125 (P3T89_07125) | comGB | 1398077..1399117 (+) | 1041 | WP_077152202.1 | competence type IV pilus assembly protein ComGB | - |
| P3T89_RS07130 (P3T89_07130) | comGC | 1399132..1399449 (+) | 318 | WP_058611611.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| P3T89_RS07135 (P3T89_07135) | - | 1399478..1399876 (+) | 399 | WP_049319406.1 | hypothetical protein | - |
| P3T89_RS07140 (P3T89_07140) | comGE | 1399860..1400141 (+) | 282 | WP_058611610.1 | competence type IV pilus minor pilin ComGE | - |
| P3T89_RS07145 (P3T89_07145) | - | 1400116..1400550 (+) | 435 | WP_049318781.1 | competence type IV pilus minor pilin ComGF | - |
| P3T89_RS07150 (P3T89_07150) | - | 1400785..1401273 (+) | 489 | WP_058611609.1 | shikimate kinase | - |
| P3T89_RS07155 (P3T89_07155) | gcvT | 1401466..1402554 (+) | 1089 | WP_058611608.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 247 a.a. Molecular weight: 28175.02 Da Isoelectric Point: 6.1622
>NTDB_id=803987 P3T89_RS07120 WP_323704906.1 1397186..1397929(+) (comGA) [Mammaliicoccus sciuri strain Dog024_1]
MEKLFKSIINDAVNSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGQSTD
MEKLFKSIINDAVNSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGQSTD
Nucleotide
Download Length: 744 bp
>NTDB_id=803987 P3T89_RS07120 WP_323704906.1 1397186..1397929(+) (comGA) [Mammaliicoccus sciuri strain Dog024_1]
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTGTCAATTCTAATGCGAGTGATATTCATTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGACTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGCAATCCACCGACTAG
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTGTCAATTCTAATGCGAGTGATATTCATTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGACTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGCAATCCACCGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.