Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   PY824_RS02030 Genome accession   NZ_CP119172
Coordinates   356974..357462 (+) Length   162 a.a.
NCBI ID   WP_115265988.1    Uniprot ID   -
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 351974..362462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS02030 (PY824_02030) comX/sigX 356974..357462 (+) 489 WP_115265988.1 sigma-70 family RNA polymerase sigma factor Regulator
  PY824_RS02035 (PY824_02035) - 357660..359021 (-) 1362 WP_014293981.1 aspartate kinase -
  PY824_RS02040 (PY824_02040) - 359115..359762 (+) 648 WP_014293982.1 HAD family phosphatase -
  PY824_RS02045 (PY824_02045) - 359972..360760 (+) 789 WP_014293983.1 enoyl-CoA hydratase -
  PY824_RS02050 (PY824_02050) - 360876..361310 (+) 435 WP_044562989.1 MarR family transcriptional regulator -
  PY824_RS02055 (PY824_02055) - 361313..362287 (+) 975 WP_014293985.1 beta-ketoacyl-ACP synthase III -

Sequence

Protein


Download         Length: 162 a.a.        Molecular weight: 19536.51 Da        Isoelectric Point: 9.1330

>NTDB_id=798034 PY824_RS02030 WP_115265988.1 356974..357462(+) (comX/sigX) [Streptococcus macedonicus strain SGM CIP105683]
MMETFESYFEKVKPIVLKLRRHYFVKLWDYDDWLQEGRVVLFRLLQEKPNLLQDDLSLYAYFKTKFSNYLKDVIRHQESL
KRKFNQLPYEEISDVGHCLAQTRFLDLADYVAYQERLQAVEQRLGAGAKEKLAKVMRGERFEGKKAFLTKIEPFFTDFNS
NW

Nucleotide


Download         Length: 489 bp        

>NTDB_id=798034 PY824_RS02030 WP_115265988.1 356974..357462(+) (comX/sigX) [Streptococcus macedonicus strain SGM CIP105683]
ATGATGGAAACATTTGAAAGCTATTTTGAAAAGGTCAAACCGATTGTGCTTAAGTTGCGTCGTCACTATTTTGTCAAATT
ATGGGACTATGATGATTGGTTACAAGAGGGACGGGTGGTTCTGTTCCGTCTCCTGCAAGAAAAGCCTAATTTGTTGCAGG
ACGACTTGTCCCTTTATGCCTATTTTAAAACGAAGTTTTCTAACTATCTCAAGGATGTGATTCGCCATCAAGAGAGTTTG
AAACGCAAGTTTAATCAGCTGCCATATGAGGAGATTAGTGACGTGGGGCATTGTTTGGCGCAAACAAGGTTTCTGGATCT
GGCGGATTATGTGGCTTATCAGGAGCGGCTGCAGGCGGTTGAGCAGCGATTAGGAGCGGGAGCAAAAGAAAAACTAGCGA
AGGTGATGCGAGGGGAGCGCTTTGAGGGGAAAAAGGCCTTCTTGACTAAAATTGAGCCTTTTTTTACTGACTTTAACTCT
AATTGGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.