Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   PY824_RS01750 Genome accession   NZ_CP119172
Coordinates   298857..299342 (+) Length   161 a.a.
NCBI ID   WP_014293910.1    Uniprot ID   -
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 293857..304342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS01750 (PY824_01750) comX/sigX 298857..299342 (+) 486 WP_014293910.1 sigma-70 family RNA polymerase sigma factor Regulator
  PY824_RS01755 (PY824_01755) - 299482..299748 (+) 267 WP_009853366.1 ACT domain-containing protein -
  PY824_RS01760 (PY824_01760) - 299760..301097 (+) 1338 WP_014293911.1 PFL family protein -
  PY824_RS01765 (PY824_01765) - 301322..302026 (+) 705 WP_014293912.1 histidine phosphatase family protein -
  PY824_RS01770 (PY824_01770) - 302010..302783 (+) 774 WP_014293913.1 M15 family metallopeptidase -
  PY824_RS01775 (PY824_01775) - 302780..303361 (+) 582 WP_014293914.1 glycoside hydrolase family 73 protein -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 19503.57 Da        Isoelectric Point: 9.3936

>NTDB_id=798030 PY824_RS01750 WP_014293910.1 298857..299342(+) (comX/sigX) [Streptococcus macedonicus strain SGM CIP105683]
MMETFESYFEKVKPIVLKLRRHYFVKLWDYDDWLQEGRVVLFRLLQEKPNLLQDDLSLYAYFKTKFSNYLKDVIRHQESL
KRKFNQLPYEEISDVGHCLAQTRFLDLADYVAYQERLQAVEQRLGVGAKEKLAKVMRGERFEGKKAFLTKIEPFFNEFRE
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=798030 PY824_RS01750 WP_014293910.1 298857..299342(+) (comX/sigX) [Streptococcus macedonicus strain SGM CIP105683]
ATGATGGAAACATTTGAAAGCTATTTTGAAAAGGTCAAACCGATTGTGCTTAAGTTGCGTCGTCACTATTTTGTCAAATT
ATGGGACTATGATGATTGGTTACAAGAGGGACGGGTGGTTCTGTTCCGTCTCCTGCAAGAAAAGCCTAATTTGTTGCAGG
ACGACTTGTCTCTTTATGCCTATTTTAAAACGAAGTTTTCCAACTATCTCAAGGATGTGATTCGCCATCAAGAGAGTTTG
AAACGCAAGTTTAATCAGCTGCCATATGAGGAGATTAGTGACGTGGGGCATTGTTTGGCGCAAACAAGGTTTCTGGATCT
GGCGGATTATGTGGCTTATCAGGAGCGGCTGCAGGCGGTTGAGCAGCGATTAGGAGTGGGAGCAAAAGAAAAACTAGCGA
AGGTGATGCGAGGGGAGCGCTTTGAGGGGAAAAAGGCCTTCTTGACTAAAATTGAGCCCTTCTTTAATGAGTTTAGGGAA
AAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.