Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   M0P24_RS09235 Genome accession   NZ_CP116957
Coordinates   1819544..1820032 (-) Length   162 a.a.
NCBI ID   WP_043910349.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP070     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1814544..1825032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS09210 (M0P24_09210) - 1815539..1816120 (-) 582 WP_003063210.1 glycoside hydrolase family 73 protein -
  M0P24_RS09215 (M0P24_09215) - 1816117..1816890 (-) 774 WP_003063208.1 M15 family metallopeptidase -
  M0P24_RS09220 (M0P24_09220) - 1816874..1817578 (-) 705 WP_041973320.1 histidine phosphatase family protein -
  M0P24_RS09225 (M0P24_09225) - 1817796..1819133 (-) 1338 WP_003063201.1 PFL family protein -
  M0P24_RS09230 (M0P24_09230) - 1819145..1819411 (-) 267 WP_003063199.1 ACT domain-containing protein -
  M0P24_RS09235 (M0P24_09235) comX/sigX 1819544..1820032 (-) 489 WP_043910349.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 162 a.a.        Molecular weight: 19559.44 Da        Isoelectric Point: 7.2748

>NTDB_id=781640 M0P24_RS09235 WP_043910349.1 1819544..1820032(-) (comX/sigX) [Streptococcus pasteurianus strain WUSP070]
MEAFEAYFEKVKPIVLKLRRHYFVKLWDYDDWLQEGRVVLFRLLQEKPDVLQDELSLYSYFKTKFSNYLKDVIRHQESLK
RKFNQLPYEEISDVGHCLAQTSFLDLADYVAYQERLQAVEQRLGIEAREKLAKVMRGERFEGKKAFLAQIEPFFNEFREN
SK

Nucleotide


Download         Length: 489 bp        

>NTDB_id=781640 M0P24_RS09235 WP_043910349.1 1819544..1820032(-) (comX/sigX) [Streptococcus pasteurianus strain WUSP070]
ATGGAAGCATTTGAAGCCTATTTTGAAAAAGTTAAACCGATTGTACTTAAGTTGCGTCGTCACTATTTTGTTAAACTGTG
GGACTACGATGATTGGTTACAAGAGGGACGGGTGGTTCTTTTCCGCCTTTTACAAGAAAAGCCAGACGTGTTGCAGGATG
AGTTGTCCCTTTATTCTTATTTTAAAACAAAGTTTTCCAACTATCTCAAGGATGTGATTCGTCATCAGGAAAGCCTGAAA
CGCAAGTTTAATCAGCTACCATATGAGGAAATTAGTGATGTGGGGCATTGTTTAGCACAAACAAGTTTTCTGGACCTGGC
GGATTATGTGGCTTATCAGGAGCGGCTGCAAGCGGTTGAGCAGCGACTGGGAATAGAGGCACGAGAGAAATTGGCGAAGG
TGATGCGTGGGGAACGCTTTGAGGGAAAAAAGGCTTTTCTAGCCCAGATTGAGCCCTTCTTTAACGAGTTTAGGGAAAAT
AGCAAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.