Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   OQG81_RS11105 Genome accession   NZ_CP113440
Coordinates   2109650..2110132 (-) Length   160 a.a.
NCBI ID   WP_414819998.1    Uniprot ID   -
Organism   Streptococcus macedonicus strain E37     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2104650..2115132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OQG81_RS11080 (OQG81_11075) - 2104888..2105661 (-) 774 WP_014293913.1 M15 family metallopeptidase -
  OQG81_RS11085 (OQG81_11080) - 2105645..2106349 (-) 705 WP_014293912.1 histidine phosphatase family protein -
  OQG81_RS11090 (OQG81_11085) - 2106502..2107677 (-) 1176 WP_265644278.1 IS256-like element IS1191 family transposase -
  OQG81_RS11095 (OQG81_11090) - 2107895..2109232 (-) 1338 WP_058621910.1 PFL family protein -
  OQG81_RS11100 (OQG81_11095) - 2109244..2109510 (-) 267 WP_265644274.1 ACT domain-containing protein -
  OQG81_RS11105 (OQG81_11100) comX/sigX 2109650..2110132 (-) 483 WP_414819998.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 19344.37 Da        Isoelectric Point: 9.5738

>NTDB_id=762314 OQG81_RS11105 WP_414819998.1 2109650..2110132(-) (comX/sigX) [Streptococcus macedonicus strain E37]
METFESYFEKVKPIVLKLRRHYFVKLWDYDDWLQEGRVVLFRLLQEKPNLLQDDLSLYAYFKTKFSNYLKDVIRHQESLK
RKFNQLPYEEISDVGHCLAQTRFLDLADYVAYKERLQAVEQRLGAGAKEKLAKVMRGERFEGKKAFLTKIEPFFNEFREK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=762314 OQG81_RS11105 WP_414819998.1 2109650..2110132(-) (comX/sigX) [Streptococcus macedonicus strain E37]
ATGGAAACATTTGAAAGCTATTTTGAAAAGGTCAAACCGATTGTGCTTAAGTTGCGTCGTCACTATTTTGTCAAATTATG
GGACTATGATGATTGGTTACAAGAGGGACGGGTGGTTCTGTTCCGTCTCCTGCAAGAAAAGCCTAATTTGTTGCAGGACG
ACTTGTCTCTTTATGCCTATTTTAAAACGAAGTTTTCCAACTATCTCAAGGATGTGATTCGCCATCAAGAGAGTTTGAAA
CGTAAGTTTAATCAGCTGCCATATGAGGAGATTAGTGACGTGGGGCATTGTTTGGCGCAAACAAGATTTCTGGATCTGGC
GGATTATGTGGCTTATAAGGAGCGGCTGCAGGCGGTTGAGCAGCGATTAGGAGCGGGAGCAAAAGAAAAACTAGCGAAGG
TGATGCGAGGGGAGCGCTTTGAGGGGAAAAAGGCCTTCTTGACTAAAATTGAGCCCTTCTTTAATGAGTTTAGGGAAAAA
TAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.