Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   OQG81_RS02225 Genome accession   NZ_CP113440
Coordinates   400890..401378 (+) Length   162 a.a.
NCBI ID   WP_014293980.1    Uniprot ID   -
Organism   Streptococcus macedonicus strain E37     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 395890..406378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OQG81_RS02225 (OQG81_02225) comX/sigX 400890..401378 (+) 489 WP_014293980.1 sigma-70 family RNA polymerase sigma factor Regulator
  OQG81_RS02230 (OQG81_02230) - 401576..402937 (-) 1362 WP_014293981.1 aspartate kinase -
  OQG81_RS02235 (OQG81_02235) - 403031..403678 (+) 648 WP_058621887.1 HAD family hydrolase -
  OQG81_RS02240 (OQG81_02240) - 403888..404676 (+) 789 WP_014293983.1 enoyl-CoA hydratase -
  OQG81_RS02245 (OQG81_02245) - 404792..405226 (+) 435 WP_012961424.1 MarR family winged helix-turn-helix transcriptional regulator -
  OQG81_RS02250 (OQG81_02250) - 405229..406203 (+) 975 WP_014293985.1 beta-ketoacyl-ACP synthase III -

Sequence

Protein


Download         Length: 162 a.a.        Molecular weight: 19536.56 Da        Isoelectric Point: 9.3937

>NTDB_id=762280 OQG81_RS02225 WP_014293980.1 400890..401378(+) (comX/sigX) [Streptococcus macedonicus strain E37]
MMETFESYFEKVKPIVLKLRRHYFVKLWDYDDWLQEGRVVLFRLLQEKPNLLQDDLSLYAYFKTKFSNYLKDVIRHQESL
KRKFNQLPYEEISDVGHCLAQTRFLDLADYVAYKERLQAVEQRLGAGAKEKLAKVMRGERFEGKKAFLTKIEPFFTDFNS
NW

Nucleotide


Download         Length: 489 bp        

>NTDB_id=762280 OQG81_RS02225 WP_014293980.1 400890..401378(+) (comX/sigX) [Streptococcus macedonicus strain E37]
ATGATGGAAACATTTGAAAGCTATTTTGAAAAGGTCAAACCGATTGTGCTTAAGTTGCGTCGTCACTATTTTGTCAAATT
ATGGGACTATGATGATTGGTTACAAGAGGGACGGGTGGTTCTGTTCCGTCTCCTGCAAGAAAAGCCTAATTTGTTGCAGG
ACGACTTGTCTCTTTATGCCTATTTTAAAACGAAGTTTTCCAACTATCTCAAGGATGTGATTCGCCATCAAGAGAGTTTG
AAACGTAAGTTTAATCAGCTGCCATATGAGGAGATTAGTGACGTGGGGCATTGTTTGGCGCAAACAAGATTTCTGGATCT
GGCGGATTATGTGGCTTATAAGGAGCGGCTGCAGGCGGTTGAGCAGCGATTAGGAGCGGGAGCAAAAGAAAAACTAGCGA
AGGTGATGCGAGGGGAGCGCTTTGAGGGGAAAAAGGCCTTCTTGACTAAAATTGAGCCTTTTTTTACTGACTTTAACTCT
AATTGGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.