Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | ONS87_RS00850 | Genome accession | NZ_CP110416 |
| Coordinates | 168254..168688 (+) | Length | 144 a.a. |
| NCBI ID | WP_132765822.1 | Uniprot ID | A0AA46HUX3 |
| Organism | Caldimonas thermodepolymerans strain DSM 15264 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 163254..173688
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ONS87_RS00830 (ONS87_00830) | - | 163440..164225 (+) | 786 | WP_104357386.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| ONS87_RS00835 (ONS87_00835) | - | 164258..164935 (+) | 678 | WP_104357387.1 | FHA domain-containing protein | - |
| ONS87_RS00840 (ONS87_00840) | - | 165042..167291 (+) | 2250 | WP_232529397.1 | CHASE2 domain-containing protein | - |
| ONS87_RS00845 (ONS87_00845) | - | 167329..168090 (+) | 762 | WP_104357388.1 | MBL fold metallo-hydrolase | - |
| ONS87_RS00850 (ONS87_00850) | comP | 168254..168688 (+) | 435 | WP_132765822.1 | pilin | Machinery gene |
| ONS87_RS00855 (ONS87_00855) | - | 168784..170697 (+) | 1914 | WP_132765820.1 | sulfatase-like hydrolase/transferase | - |
| ONS87_RS00860 (ONS87_00860) | - | 170796..171950 (+) | 1155 | WP_265119613.1 | O-antigen ligase family protein | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14889.98 Da Isoelectric Point: 4.3449
>NTDB_id=754898 ONS87_RS00850 WP_132765822.1 168254..168688(+) (comP) [Caldimonas thermodepolymerans strain DSM 15264]
MKQLRPIQRVQQGFTLIELMIVVAIIGILAAIALPAYQDYTVRARVSEGLVIASGAKATVSENLASGLTGAEACNGVAEG
ETGRTDLQCADDGVLTATVESGVSSVGDVVLTLTPTVASTGVEWACSTSSDFKYVPAECRRTAP
MKQLRPIQRVQQGFTLIELMIVVAIIGILAAIALPAYQDYTVRARVSEGLVIASGAKATVSENLASGLTGAEACNGVAEG
ETGRTDLQCADDGVLTATVESGVSSVGDVVLTLTPTVASTGVEWACSTSSDFKYVPAECRRTAP
Nucleotide
Download Length: 435 bp
>NTDB_id=754898 ONS87_RS00850 WP_132765822.1 168254..168688(+) (comP) [Caldimonas thermodepolymerans strain DSM 15264]
ATGAAGCAACTTCGTCCCATCCAGCGCGTGCAACAAGGTTTCACGCTGATCGAACTGATGATCGTCGTGGCGATCATCGG
TATCCTGGCCGCCATCGCGCTGCCCGCCTATCAAGACTACACGGTGCGCGCCCGCGTGTCGGAAGGCCTGGTGATCGCCT
CCGGCGCCAAGGCCACCGTGTCTGAAAACCTGGCTTCCGGCCTGACCGGTGCCGAGGCCTGCAACGGTGTGGCCGAAGGC
GAAACCGGCCGTACTGATCTCCAGTGCGCCGACGACGGCGTGCTGACCGCCACCGTGGAGAGCGGTGTGTCCTCCGTCGG
TGACGTCGTGCTGACCCTGACCCCGACCGTGGCTTCGACGGGCGTCGAATGGGCGTGCTCGACCTCGTCGGACTTCAAGT
ACGTGCCGGCTGAGTGCCGTCGTACGGCCCCCTGA
ATGAAGCAACTTCGTCCCATCCAGCGCGTGCAACAAGGTTTCACGCTGATCGAACTGATGATCGTCGTGGCGATCATCGG
TATCCTGGCCGCCATCGCGCTGCCCGCCTATCAAGACTACACGGTGCGCGCCCGCGTGTCGGAAGGCCTGGTGATCGCCT
CCGGCGCCAAGGCCACCGTGTCTGAAAACCTGGCTTCCGGCCTGACCGGTGCCGAGGCCTGCAACGGTGTGGCCGAAGGC
GAAACCGGCCGTACTGATCTCCAGTGCGCCGACGACGGCGTGCTGACCGCCACCGTGGAGAGCGGTGTGTCCTCCGTCGG
TGACGTCGTGCTGACCCTGACCCCGACCGTGGCTTCGACGGGCGTCGAATGGGCGTGCTCGACCTCGTCGGACTTCAAGT
ACGTGCCGGCTGAGTGCCGTCGTACGGCCCCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
50.658 |
100 |
0.535 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
42.262 |
100 |
0.493 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.794 |
94.444 |
0.451 |
| pilA2 | Legionella pneumophila str. Paris |
47.794 |
94.444 |
0.451 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.747 |
100 |
0.424 |
| pilE | Neisseria gonorrhoeae MS11 |
37.195 |
100 |
0.424 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.143 |
97.222 |
0.41 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
43.182 |
91.667 |
0.396 |
| pilA | Haemophilus influenzae 86-028NP |
40.299 |
93.056 |
0.375 |
| pilA | Glaesserella parasuis strain SC1401 |
35.811 |
100 |
0.368 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.063 |
99.306 |
0.368 |
| pilA | Acinetobacter baumannii strain A118 |
35.333 |
100 |
0.368 |