Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   PUW52_RS09570 Genome accession   NZ_CP118078
Coordinates   1888613..1890943 (-) Length   776 a.a.
NCBI ID   WP_070815209.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI16     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1883613..1895943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS09555 (PUW52_09555) sstT 1884607..1885821 (+) 1215 WP_274984516.1 serine/threonine transporter SstT -
  PUW52_RS09560 (PUW52_09560) trxA 1886604..1886918 (-) 315 WP_024052465.1 thioredoxin -
  PUW52_RS09565 (PUW52_09565) - 1887127..1888545 (-) 1419 WP_024052466.1 C69 family dipeptidase -
  PUW52_RS09570 (PUW52_09570) mutS/mutS2 1888613..1890943 (-) 2331 WP_070815209.1 endonuclease MutS2 Machinery gene
  PUW52_RS09575 (PUW52_09575) - 1891004..1891552 (-) 549 WP_070815210.1 CvpA family protein -
  PUW52_RS09580 (PUW52_09580) - 1891549..1891854 (-) 306 WP_070812341.1 hypothetical protein -
  PUW52_RS09585 (PUW52_09585) rnhC 1891940..1892830 (+) 891 WP_070812342.1 ribonuclease HIII -
  PUW52_RS09590 (PUW52_09590) lepB 1892834..1893448 (+) 615 WP_274984517.1 signal peptidase I -

Sequence

Protein


Download         Length: 776 a.a.        Molecular weight: 87473.91 Da        Isoelectric Point: 5.3940

>NTDB_id=721040 PUW52_RS09570 WP_070815209.1 1888613..1890943(-) (mutS/mutS2) [Streptococcus anginosus strain VSI16]
MNRKILETLEFGKIKALFEPYLLTEQGCLELQQLFPSNKQERLETAFLEMTDMQQIFVQRPHFSLAATQDITGLTKRLEL
EGDLNIEEFLALKRVLAVTQELTDFYEDLENVELQRLNRLFENLVSFPSLQGALQAINEGGFVESFASDNLARIRRKIQE
NEVQVRDILQDILKTKGDMLADQVVASRNGRNVLPVKNTFRNRISGVVHDISASGNTVYIEPRAVVNLNEEITNARADER
YEILRILQELSDRIRPHIAEIANNAWIIGHLDLVRAKVCFMQERGAVVPMLSDSKDIRLLHVAHPLIENAVANDLYFAAD
LTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADEGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQAD
ENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKVYGIETEGVQNASMEFDTESLRPTYRFMQGVPG
RSNAFEIARRLGLSDRVVKDAQELTDTDSDVNRVIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIIDVALTESDTILKNLHAKSSLKPHEIIEAKSQLKKLAPETVDLSQNKVLKQAKKARKPKVGDDILVISY
GQRGTLVNQLKDGRWEAQVGLIKMTLEEAEFNLLKAEKEQPKRKQVNVVKRTSTSGPRARLDLRGKRYEEAMQELDTFID
QALLNNMAQVDIIHGIGTGIIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVVFK

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=721040 PUW52_RS09570 WP_070815209.1 1888613..1890943(-) (mutS/mutS2) [Streptococcus anginosus strain VSI16]
ATGAATAGAAAAATTTTAGAAACGTTAGAATTTGGGAAAATCAAGGCGCTCTTTGAACCCTATCTTCTGACAGAACAAGG
GTGCTTGGAATTGCAACAGTTGTTCCCGTCCAATAAACAAGAAAGGCTGGAGACAGCATTTTTAGAAATGACGGACATGC
AGCAGATTTTTGTGCAGCGTCCGCATTTCAGTCTGGCTGCGACCCAAGACATTACGGGCTTGACCAAGCGCTTGGAGCTG
GAAGGCGACTTAAACATTGAAGAATTTCTCGCTCTGAAGCGGGTTTTGGCTGTCACGCAAGAATTGACTGATTTTTATGA
GGATTTGGAAAATGTTGAGTTGCAAAGATTGAATCGGCTTTTTGAAAATTTGGTTTCTTTTCCGAGCTTGCAAGGAGCGT
TGCAGGCTATCAATGAGGGCGGATTTGTTGAAAGTTTTGCTAGTGATAATTTGGCTCGCATTCGCCGAAAAATTCAAGAA
AATGAAGTTCAAGTGAGAGATATTTTGCAAGATATTCTCAAAACCAAGGGCGATATGTTAGCAGATCAAGTAGTAGCTAG
TCGAAACGGTCGCAATGTTTTGCCGGTCAAAAATACATTCCGCAATCGTATCTCAGGCGTGGTGCACGATATTTCTGCCA
GTGGAAACACGGTGTATATTGAGCCGCGGGCGGTGGTCAATCTCAATGAAGAAATCACCAATGCGCGGGCAGACGAGCGC
TATGAGATTTTGCGGATTTTACAAGAGTTGTCTGACCGCATACGTCCTCATATTGCTGAAATTGCTAATAATGCTTGGAT
TATCGGACATTTGGATCTAGTTCGGGCAAAAGTGTGTTTTATGCAGGAAAGAGGCGCGGTGGTGCCAATGCTGTCTGATA
GTAAGGATATTCGCCTGCTCCATGTTGCTCATCCTCTGATAGAAAATGCAGTAGCCAATGACTTGTACTTTGCGGCGGAT
TTGACTGAGATTGTCATTACGGGCCCGAATACAGGCGGAAAGACCATTATGCTCAAAACCCTAGGCTTGGCTCAGCTTAT
GGCACAGTCTGGCCTGCCTATTTTGGCAGATGAAGGGAGTCGAGTGGGGATTTTTGACCAAATCTTTGCGGACATTGGAG
ACGAGCAGTCTATTGAGCAGAGTTTGTCGACTTTCTCCAGCCATATGACGAACATTGTCTCTATTTTAGAGCAGGCTGAT
GAGAATGCCTTGGTGCTTTTGGATGAGCTTGGAGCTGGAACCGACCCGCAGGAGGGTGCAGCTCTTGCTATGGCAATTCT
TGAAGACTTGCGACTGCGACAGGTCAAGACAATGGCAACGACCCACTATCCAGAGCTTAAGGTCTATGGGATTGAGACTG
AGGGAGTGCAAAATGCCAGCATGGAGTTTGATACAGAAAGCCTAAGGCCAACTTATCGTTTTATGCAGGGAGTGCCGGGT
CGCTCCAATGCTTTTGAGATTGCAAGGCGTTTAGGTCTGTCTGATAGAGTGGTCAAGGATGCTCAAGAATTGACTGACAC
GGACAGCGATGTCAATCGCGTTATTGAGCGCTTGGAAGAACAGACATTGGAAAGTCGCAAGCGGTTGGATAATATCCGAG
AAGTGGAGCAAGAAAATCTCAAATTTAACCGTGCTCTTAAAAAGCTCTACAATGAGTTCAATCGGGAAAAAGAAACTGAG
CTAAATAAGGCAAGGCTGGAAGCGCAGGAAATCATTGATGTGGCGCTGACCGAGAGTGATACGATTCTCAAAAATCTACA
TGCTAAGTCCAGTCTCAAACCGCACGAAATTATCGAAGCCAAAAGCCAGCTGAAAAAATTGGCTCCTGAAACGGTGGATT
TGTCACAGAATAAAGTGTTGAAACAAGCCAAAAAAGCACGGAAACCAAAAGTGGGAGACGATATTCTGGTGATTAGCTAC
GGTCAGAGAGGCACGCTTGTCAATCAGCTCAAAGACGGTCGCTGGGAAGCACAGGTGGGACTCATCAAGATGACCTTGGA
GGAAGCAGAGTTTAACCTGCTCAAAGCTGAAAAAGAACAGCCTAAGCGCAAGCAGGTCAATGTGGTGAAACGAACAAGCA
CAAGCGGACCAAGAGCCCGACTGGATTTGCGAGGAAAACGTTATGAAGAAGCCATGCAAGAGCTGGATACCTTTATCGAC
CAAGCCTTGCTCAACAATATGGCACAGGTGGATATTATTCACGGGATCGGGACGGGCATCATTCGCGAAGGCGTCACCAA
ATATCTCCGTCGCAATAAGCATGTCAAGAGTTTCGGCTATGCACCGCAAAATGCTGGGGGCAGCGGAGCAACGATTGTGG
TGTTTAAGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-669)

Smr domain (Smr)

(701-776)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.594

100

0.402