Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | EL388_RS01410 | Genome accession | NZ_AP018721 |
| Coordinates | 268591..269721 (+) | Length | 376 a.a. |
| NCBI ID | WP_269470952.1 | Uniprot ID | A0A4R3K0E0 |
| Organism | Sulfuritortus calidifontis strain J1A | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 263591..274721
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL388_RS01400 | acs | 265938..267908 (+) | 1971 | WP_126458554.1 | acetate--CoA ligase | - |
| EL388_RS01405 | - | 268349..268570 (+) | 222 | WP_126458557.1 | hypothetical protein | - |
| EL388_RS01410 | pilU | 268591..269721 (+) | 1131 | WP_269470952.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| EL388_RS01415 | - | 269819..270103 (+) | 285 | WP_232019152.1 | hypothetical protein | - |
| EL388_RS01420 | - | 270103..270357 (+) | 255 | WP_126458560.1 | hypothetical protein | - |
| EL388_RS01425 | - | 270459..271085 (+) | 627 | WP_126458563.1 | Rieske 2Fe-2S domain-containing protein | - |
| EL388_RS01430 | - | 271179..273206 (+) | 2028 | WP_126458566.1 | methyl-accepting chemotaxis protein | - |
| EL388_RS01435 | - | 273260..273805 (-) | 546 | WP_126458569.1 | NUDIX domain-containing protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 41773.08 Da Isoelectric Point: 6.1340
>NTDB_id=70466 EL388_RS01410 WP_269470952.1 268591..269721(+) (pilU) [Sulfuritortus calidifontis strain J1A]
MKTDSQYFKFVAGLLKLMVDKGGSDLFVTVGAPPSIKLHGEMTPVNNTPVTREQAEELVASVMNDKQRQEFQETHECNWA
ISLEGIGRFRMNAYVQRSSPGMVCRTINTTIPNFDELGLPPVLKEVMMEKRGLVLMVGGTGSGKSTSLAAMLDHRNVNSK
GHIISVEDPIEFVHPHKGCLVMQREVGVDTDSWFAALKNTLRQAPDVILIGEIRDRDTMDYAIAFAETGHLCLATLHANN
SNQALDRIINFFPIDRRDQLLMDLSLNLKALVSQRLIPKKGGGRVPAVEIMINSPLISDLILKGDVHEIKPIMAKSRDHG
MQTFDQALFDLAMAGQIERETALRYADSYNELRLMFKLHGGGEGDEDDKTKDLSIV
MKTDSQYFKFVAGLLKLMVDKGGSDLFVTVGAPPSIKLHGEMTPVNNTPVTREQAEELVASVMNDKQRQEFQETHECNWA
ISLEGIGRFRMNAYVQRSSPGMVCRTINTTIPNFDELGLPPVLKEVMMEKRGLVLMVGGTGSGKSTSLAAMLDHRNVNSK
GHIISVEDPIEFVHPHKGCLVMQREVGVDTDSWFAALKNTLRQAPDVILIGEIRDRDTMDYAIAFAETGHLCLATLHANN
SNQALDRIINFFPIDRRDQLLMDLSLNLKALVSQRLIPKKGGGRVPAVEIMINSPLISDLILKGDVHEIKPIMAKSRDHG
MQTFDQALFDLAMAGQIERETALRYADSYNELRLMFKLHGGGEGDEDDKTKDLSIV
Nucleotide
Download Length: 1131 bp
>NTDB_id=70466 EL388_RS01410 WP_269470952.1 268591..269721(+) (pilU) [Sulfuritortus calidifontis strain J1A]
GTGAAAACCGATAGCCAGTACTTCAAATTCGTCGCCGGCCTGTTGAAGCTGATGGTGGACAAGGGCGGTTCCGACCTCTT
CGTCACCGTCGGCGCGCCGCCGTCGATCAAACTGCACGGCGAGATGACTCCGGTGAACAACACCCCGGTCACGCGCGAGC
AGGCCGAGGAACTGGTCGCCTCGGTGATGAACGACAAGCAGCGCCAGGAATTTCAGGAGACCCACGAATGCAACTGGGCG
ATCAGCCTGGAGGGCATCGGCCGGTTCCGGATGAACGCCTATGTCCAGCGCAGCTCGCCCGGCATGGTCTGCCGGACCAT
CAATACCACCATCCCCAACTTCGACGAACTGGGCCTGCCGCCGGTGTTGAAGGAGGTGATGATGGAAAAGCGCGGCCTGG
TGCTGATGGTGGGCGGCACCGGTTCGGGCAAGTCGACCAGCCTGGCCGCCATGCTCGACCATCGCAACGTCAACTCCAAG
GGCCACATCATCTCGGTCGAGGATCCGATCGAGTTCGTCCATCCGCACAAGGGCTGCCTGGTGATGCAGCGCGAGGTGGG
GGTGGATACCGACAGCTGGTTCGCCGCCCTGAAGAACACCCTGCGCCAGGCACCGGACGTGATCCTGATCGGCGAGATCC
GCGACCGCGACACCATGGACTATGCCATCGCCTTCGCCGAGACCGGCCACCTCTGCCTGGCCACCCTGCATGCCAACAAC
TCCAACCAGGCGCTGGACCGGATCATCAACTTCTTCCCGATCGACCGGCGCGACCAGCTGCTGATGGACCTCTCGCTCAA
CCTCAAGGCCCTGGTCTCCCAGCGGCTGATCCCGAAGAAGGGTGGCGGCCGGGTGCCGGCGGTGGAGATCATGATCAACT
CGCCGCTGATCTCCGACCTCATCCTCAAGGGCGATGTACACGAGATCAAGCCGATCATGGCCAAGTCGCGCGACCACGGC
ATGCAGACCTTCGACCAGGCCCTGTTCGACCTGGCCATGGCCGGCCAGATCGAGCGGGAGACCGCCCTGCGCTACGCCGA
TTCCTACAACGAGCTGCGCCTGATGTTCAAGCTGCACGGCGGCGGCGAGGGCGACGAGGACGACAAGACCAAGGACCTGT
CGATCGTCTGA
GTGAAAACCGATAGCCAGTACTTCAAATTCGTCGCCGGCCTGTTGAAGCTGATGGTGGACAAGGGCGGTTCCGACCTCTT
CGTCACCGTCGGCGCGCCGCCGTCGATCAAACTGCACGGCGAGATGACTCCGGTGAACAACACCCCGGTCACGCGCGAGC
AGGCCGAGGAACTGGTCGCCTCGGTGATGAACGACAAGCAGCGCCAGGAATTTCAGGAGACCCACGAATGCAACTGGGCG
ATCAGCCTGGAGGGCATCGGCCGGTTCCGGATGAACGCCTATGTCCAGCGCAGCTCGCCCGGCATGGTCTGCCGGACCAT
CAATACCACCATCCCCAACTTCGACGAACTGGGCCTGCCGCCGGTGTTGAAGGAGGTGATGATGGAAAAGCGCGGCCTGG
TGCTGATGGTGGGCGGCACCGGTTCGGGCAAGTCGACCAGCCTGGCCGCCATGCTCGACCATCGCAACGTCAACTCCAAG
GGCCACATCATCTCGGTCGAGGATCCGATCGAGTTCGTCCATCCGCACAAGGGCTGCCTGGTGATGCAGCGCGAGGTGGG
GGTGGATACCGACAGCTGGTTCGCCGCCCTGAAGAACACCCTGCGCCAGGCACCGGACGTGATCCTGATCGGCGAGATCC
GCGACCGCGACACCATGGACTATGCCATCGCCTTCGCCGAGACCGGCCACCTCTGCCTGGCCACCCTGCATGCCAACAAC
TCCAACCAGGCGCTGGACCGGATCATCAACTTCTTCCCGATCGACCGGCGCGACCAGCTGCTGATGGACCTCTCGCTCAA
CCTCAAGGCCCTGGTCTCCCAGCGGCTGATCCCGAAGAAGGGTGGCGGCCGGGTGCCGGCGGTGGAGATCATGATCAACT
CGCCGCTGATCTCCGACCTCATCCTCAAGGGCGATGTACACGAGATCAAGCCGATCATGGCCAAGTCGCGCGACCACGGC
ATGCAGACCTTCGACCAGGCCCTGTTCGACCTGGCCATGGCCGGCCAGATCGAGCGGGAGACCGCCCTGCGCTACGCCGA
TTCCTACAACGAGCTGCGCCTGATGTTCAAGCTGCACGGCGGCGGCGAGGGCGACGAGGACGACAAGACCAAGGACCTGT
CGATCGTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
64.023 |
93.883 |
0.601 |
| pilU | Acinetobacter baylyi ADP1 |
59.942 |
92.287 |
0.553 |
| pilU | Vibrio cholerae strain A1552 |
53.333 |
91.755 |
0.489 |
| pilT | Acinetobacter baylyi ADP1 |
42.604 |
89.894 |
0.383 |
| pilT | Pseudomonas aeruginosa PAK |
43.373 |
88.298 |
0.383 |
| pilT | Acinetobacter nosocomialis M2 |
43.072 |
88.298 |
0.38 |
| pilT | Acinetobacter baumannii strain A118 |
43.072 |
88.298 |
0.38 |
| pilT | Acinetobacter baumannii D1279779 |
43.072 |
88.298 |
0.38 |
| pilT | Legionella pneumophila strain Lp02 |
42.169 |
88.298 |
0.372 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.169 |
88.298 |
0.372 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.867 |
88.298 |
0.37 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.857 |
85.638 |
0.367 |