Detailed information NTG0068381

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JLF69_RS22990
• Genome accession: NZ_AP022549
• Coordinates: 4761541..4762566 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain THO-015
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4756541..4767566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JLF69_RS22970 (THOESC015_44460)	metJ	4757726..4758043 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
JLF69_RS22975 (THOESC015_44470)	yiiX	4758103..4758711 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
JLF69_RS22980 (THOESC015_44480)	rpmE	4758772..4758984 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JLF69_RS22985 (THOESC015_44490)	priA	4759187..4761385 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
JLF69_RS22990 (THOESC015_44500)	cytR	4761541..4762566 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
JLF69_RS22995 (THOESC015_44510)	ftsN	4762658..4763617 (+)	960	WP_000068834.1	cell division protein FtsN	-
JLF69_RS23000 (THOESC015_44520)	hslV	4763710..4764240 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JLF69_RS23005 (THOESC015_44530)	hslU	4764250..4765581 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
JLF69_RS23010 (THOESC015_44540)	menA	4765648..4766574 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JLF69_RS23015 (THOESC015_44550)	rraA	4766667..4767152 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JLF69_RS23020 (THOESC015_44560)	zapB	4767237..4767482 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=68381 JLF69_RS22990 WP_000644908.1 4761541..4762566(+) (cytR) [Escherichia coli strain THO-015]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=68381 JLF69_RS22990 WP_000644908.1 4761541..4762566(+) (cytR) [Escherichia coli strain THO-015]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625