Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SNAG_RS09720 Genome accession   NZ_AP017652
Coordinates   1923754..1924512 (+) Length   252 a.a.
NCBI ID   WP_004239627.1    Uniprot ID   E0PNN0
Organism   Streptococcus sp. NPS 308     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1918754..1929512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNAG_RS09690 (SNAG_1897) comE 1919346..1920098 (-) 753 WP_000866077.1 competence system response regulator transcription factor ComE Regulator
  SNAG_RS09695 (SNAG_1898) comD 1920095..1921414 (-) 1320 WP_096408763.1 competence system sensor histidine kinase ComD Regulator
  SNAG_RS09700 (SNAG_1899) comC/comC2 1921435..1921560 (-) 126 WP_096408765.1 competence-stimulating peptide ComC Regulator
  SNAG_RS09710 (SNAG_1901) rlmH 1921841..1922320 (-) 480 WP_096408768.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SNAG_RS09715 (SNAG_1902) htrA 1922506..1923696 (+) 1191 WP_096408770.1 S1C family serine protease Regulator
  SNAG_RS09720 (SNAG_1903) spo0J 1923754..1924512 (+) 759 WP_004239627.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29047.49 Da        Isoelectric Point: 8.3001

>NTDB_id=68385 SNAG_RS09720 WP_004239627.1 1923754..1924512(+) (spo0J) [Streptococcus sp. NPS 308]
MEKFEMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPALVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEHILSEVENGKISQAHA
RSLVGLDKEQQEYFFQLIKNEDISVRKLETLLTEKKQKKQKKSDSFIKDEEDKLKKLLGVNVEIKLSKKDTGKIVISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=68385 SNAG_RS09720 WP_004239627.1 1923754..1924512(+) (spo0J) [Streptococcus sp. NPS 308]
ATGGAAAAATTTGAAATGATTTCTATCTCAGAAATACAAAAAAATCCTTACCAACCTCGAAAAGAATTTGATGCAGATAA
ATTAAAGGAATTAGCTCAATCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTAGCTGGTCTTACTTCTATTCCAGCCCTTGTGAAACAT
CTCTCAGATCAGGAAATGATGATCCAGTCTATCATTGAGAATCTGCAGAGAGAAAACTTAAATCCAGTTGAAGAGGCACG
CGCCTACGAATCTTTGGTAGAAAAAGGATTTACTCATACTGAGATAGCGGATAAAATGGGAAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAGCATATCTTATCTGAAGTGGAAAATGGAAAAATCTCTCAAGCTCATGCA
CGTTCACTAGTTGGTTTGGATAAAGAGCAGCAAGAATATTTCTTCCAATTAATCAAAAACGAAGACATCTCTGTGAGAAA
ACTAGAAACACTGCTGACAGAAAAAAAACAAAAGAAACAGAAAAAAAGTGACTCTTTCATCAAAGATGAGGAAGATAAAT
TGAAAAAACTACTTGGAGTGAATGTAGAAATTAAACTTTCTAAAAAAGATACTGGAAAGATTGTTATTTCTTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PNN0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504

Multiple sequence alignment