Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | LLJ08_RS15915 | Genome accession | NZ_CP086067 |
| Coordinates | 3411551..3411982 (+) | Length | 143 a.a. |
| NCBI ID | WP_179484726.1 | Uniprot ID | - |
| Organism | Stutzerimonas chloritidismutans strain 6L11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3406551..3416982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLJ08_RS15890 (LLJ08_15895) | coaE | 3406697..3407305 (-) | 609 | WP_179484722.1 | dephospho-CoA kinase | - |
| LLJ08_RS15895 (LLJ08_15900) | pilD | 3407437..3408306 (-) | 870 | WP_179484723.1 | prepilin peptidase | Machinery gene |
| LLJ08_RS15900 (LLJ08_15905) | pilC | 3408309..3409526 (-) | 1218 | WP_179484724.1 | type II secretion system F family protein | Machinery gene |
| LLJ08_RS15905 (LLJ08_15910) | pilB | 3409528..3411231 (-) | 1704 | WP_179484725.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| LLJ08_RS15915 (LLJ08_15920) | pilA/pilA1 | 3411551..3411982 (+) | 432 | WP_179484726.1 | pilin | Machinery gene |
| LLJ08_RS15920 (LLJ08_15925) | cysN | 3412348..3414246 (-) | 1899 | WP_228207446.1 | sulfate adenylyltransferase subunit CysN | - |
| LLJ08_RS15925 (LLJ08_15930) | cysD | 3414258..3415175 (-) | 918 | WP_228207447.1 | sulfate adenylyltransferase subunit CysD | - |
| LLJ08_RS15930 (LLJ08_15935) | - | 3415361..3416119 (-) | 759 | WP_228207448.1 | Nif3-like dinuclear metal center hexameric protein | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14317.19 Da Isoelectric Point: 4.4882
>NTDB_id=622286 LLJ08_RS15915 WP_179484726.1 3411551..3411982(+) (pilA/pilA1) [Stutzerimonas chloritidismutans strain 6L11]
MKAQMQKGFTLIELMIVVAIIGILAAIALPAYQDYTARAQATEGLSATAGVRAEIASQLAVDGAVPGAGSQADTDAQALA
GNYFAAGGATVGANGQISVVFNAGTLSGQTMTITPTVDATSNQIQGWTCAGLTNTSHIPSGCR
MKAQMQKGFTLIELMIVVAIIGILAAIALPAYQDYTARAQATEGLSATAGVRAEIASQLAVDGAVPGAGSQADTDAQALA
GNYFAAGGATVGANGQISVVFNAGTLSGQTMTITPTVDATSNQIQGWTCAGLTNTSHIPSGCR
Nucleotide
Download Length: 432 bp
>NTDB_id=622286 LLJ08_RS15915 WP_179484726.1 3411551..3411982(+) (pilA/pilA1) [Stutzerimonas chloritidismutans strain 6L11]
ATGAAAGCTCAGATGCAGAAGGGTTTTACTCTTATCGAACTGATGATTGTCGTCGCGATCATTGGCATCCTGGCAGCGAT
TGCACTTCCGGCCTATCAAGACTACACCGCTCGCGCACAAGCAACTGAAGGGCTTTCTGCCACTGCAGGCGTGCGAGCAG
AAATCGCTAGCCAACTGGCAGTCGATGGCGCAGTTCCTGGCGCTGGTTCGCAAGCAGATACTGACGCGCAAGCGTTGGCA
GGCAATTATTTTGCTGCAGGCGGTGCAACTGTTGGTGCTAACGGGCAAATCTCGGTCGTTTTTAACGCCGGTACGCTTTC
TGGCCAAACGATGACTATCACCCCGACAGTTGATGCTACCTCGAACCAGATCCAAGGCTGGACCTGCGCTGGCTTGACAA
ATACTTCTCATATTCCGTCGGGCTGCCGTTAA
ATGAAAGCTCAGATGCAGAAGGGTTTTACTCTTATCGAACTGATGATTGTCGTCGCGATCATTGGCATCCTGGCAGCGAT
TGCACTTCCGGCCTATCAAGACTACACCGCTCGCGCACAAGCAACTGAAGGGCTTTCTGCCACTGCAGGCGTGCGAGCAG
AAATCGCTAGCCAACTGGCAGTCGATGGCGCAGTTCCTGGCGCTGGTTCGCAAGCAGATACTGACGCGCAAGCGTTGGCA
GGCAATTATTTTGCTGCAGGCGGTGCAACTGTTGGTGCTAACGGGCAAATCTCGGTCGTTTTTAACGCCGGTACGCTTTC
TGGCCAAACGATGACTATCACCCCGACAGTTGATGCTACCTCGAACCAGATCCAAGGCTGGACCTGCGCTGGCTTGACAA
ATACTTCTCATATTCCGTCGGGCTGCCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Eikenella corrodens VA1 |
55.556 |
100 |
0.594 |
| pilA2 | Legionella pneumophila str. Paris |
46.763 |
97.203 |
0.455 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
43.885 |
97.203 |
0.427 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
44.118 |
95.105 |
0.42 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.096 |
100 |
0.42 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
35.976 |
100 |
0.413 |
| pilA | Pseudomonas aeruginosa PAK |
36.709 |
100 |
0.406 |
| comP | Acinetobacter baylyi ADP1 |
39.041 |
100 |
0.399 |
| pilA | Acinetobacter baumannii strain A118 |
38.129 |
97.203 |
0.371 |