Detailed information NTG0621422

Bioinformatically predicted

Overview

• Name: comE
• Type: Regulator
• Locus tag: LK450_RS06905
• Genome accession: NZ_CP085939
• Coordinates: 1405642..1406391 (+)
• Length: 249 a.a.
• NCBI ID: WP_018543656.1
• Uniprot ID: -
• Organism: Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569
• Function: activate transcription of early competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1400642..1411391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK450_RS06875 (LK450_06875)	spo0J	1401186..1401953 (-)	768	WP_003032028.1	ParB/RepB/Spo0J family partition protein	Regulator
LK450_RS06880 (LK450_06880)	htrA	1402008..1403198 (-)	1191	WP_003032033.1	S1C family serine protease	Regulator
LK450_RS06885 (LK450_06885)	rlmH	1403392..1403871 (+)	480	WP_003032032.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	-
LK450_RS06895 (LK450_06895)	-	1404153..1404299 (+)	147	WP_003029519.1	bacteriocin	-
LK450_RS06900 (LK450_06900)	comD/comD2	1404320..1405642 (+)	1323	WP_221739197.1	GHKL domain-containing protein	Regulator
LK450_RS06905 (LK450_06905)	comE	1405642..1406391 (+)	750	WP_018543656.1	competence system response regulator transcription factor ComE	Regulator
LK450_RS06920 (LK450_06920)	-	1406739..1409315 (-)	2577	WP_018543657.1	YfhO family protein	-
LK450_RS06925 (LK450_06925)	-	1409382..1411004 (-)	1623	WP_003030724.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 249 a.a.
• Molecular weight: 29221.90 Da
• Isoelectric Point: 8.9767

>NTDB_id=621422 LK450_RS06905 WP_018543656.1 1405642..1406391(+) (comE) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MKVLVLEDEISHQVRMETTLAEIAKEMGITIKVKVTGKVREFKEYIENDEVNQLYFLDIDIKGEETKGLEIAKFIRHHNP
YAIIVFVTTKSEFATMTFKYKVSALDFVDKNLSDVAFKKRIKDSIEYTKATLIENKDMVDYFEYSFRGGEVRMPFNDILY
IETTGSSHKLRIVGKNFFKEFYGTIADIQEKDKETRRFFSPHKSYLVNIGNIKGYDKKMREIIFYEDHRCPITRMKIGKL
KAILEELKG

Nucleotide

• Length: 750 bp

>NTDB_id=621422 LK450_RS06905 WP_018543656.1 1405642..1406391(+) (comE) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGAAAGTATTAGTATTAGAAGATGAAATTTCACATCAAGTAAGAATGGAAACAACTTTGGCAGAAATTGCGAAAGAAAT
GGGAATTACAATAAAGGTTAAAGTAACTGGTAAAGTAAGAGAATTTAAAGAATATATTGAAAATGATGAGGTGAATCAAT
TATATTTTTTAGATATTGATATCAAAGGAGAGGAAACAAAAGGTTTAGAAATAGCAAAATTTATACGTCATCACAATCCG
TATGCCATTATTGTTTTTGTTACAACAAAATCAGAATTTGCTACGATGACCTTCAAATATAAGGTATCTGCACTGGATTT
TGTTGATAAAAATTTGAGTGATGTTGCTTTTAAAAAACGTATAAAAGACAGCATTGAGTATACAAAAGCAACATTGATTG
AAAATAAAGATATGGTGGATTATTTTGAATATAGCTTTCGTGGCGGAGAGGTTAGAATGCCTTTTAATGACATTTTATAT
ATTGAAACGACAGGCTCTTCTCATAAATTAAGAATTGTCGGTAAAAACTTTTTTAAAGAATTCTATGGCACTATTGCAGA
TATTCAAGAAAAAGATAAAGAAACAAGACGTTTCTTTTCACCTCATAAATCCTACCTAGTCAATATTGGAAACATCAAAG
GTTATGACAAAAAAATGCGAGAAATAATTTTTTATGAAGATCATCGTTGTCCGATTACTCGAATGAAAATTGGAAAATTA
AAAGCTATTTTAGAGGAATTAAAAGGATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-121)

• LytTr DNA-binding domain (LytTR) (152-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Streptococcus mitis NCTC 12261	71.02	98.394	0.699
comE/comE2	Streptococcus gordonii strain NCTC7865	70.902	97.992	0.695
comE/comE1	Streptococcus gordonii str. Challis substr. CH1	70.902	97.992	0.695
comE	Streptococcus infantis strain Atu-4	70.204	98.394	0.691
comE	Streptococcus mitis SK321	70.204	98.394	0.691
comE	Streptococcus pneumoniae Rx1	69.796	98.394	0.687
comE	Streptococcus pneumoniae D39	69.796	98.394	0.687
comE	Streptococcus pneumoniae R6	69.796	98.394	0.687
comE	Streptococcus pneumoniae TIGR4	69.796	98.394	0.687
comE/blpR	Streptococcus mutans UA159	40.891	99.197	0.406
comE/comE2	Streptococcus equinus JB1	34.749	100	0.361