Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   LK450_RS06875 Genome accession   NZ_CP085939
Coordinates   1401186..1401953 (-) Length   255 a.a.
NCBI ID   WP_003032028.1    Uniprot ID   A0A2T0FRM2
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396186..1406953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS06850 (LK450_06850) ychF 1396339..1397454 (-) 1116 WP_003032450.1 redox-regulated ATPase YchF -
  LK450_RS06855 (LK450_06855) - 1397600..1398100 (+) 501 WP_003032448.1 YehR family lipoprotein -
  LK450_RS06860 (LK450_06860) - 1398124..1398321 (-) 198 WP_003032456.1 DUF951 domain-containing protein -
  LK450_RS06865 (LK450_06865) dnaN 1398321..1399457 (-) 1137 WP_003032449.1 DNA polymerase III subunit beta -
  LK450_RS06870 (LK450_06870) dnaA 1399614..1400957 (-) 1344 WP_003032031.1 chromosomal replication initiator protein DnaA -
  LK450_RS06875 (LK450_06875) spo0J 1401186..1401953 (-) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator
  LK450_RS06880 (LK450_06880) htrA 1402008..1403198 (-) 1191 WP_003032033.1 S1C family serine protease Regulator
  LK450_RS06885 (LK450_06885) rlmH 1403392..1403871 (+) 480 WP_003032032.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LK450_RS06895 (LK450_06895) - 1404153..1404299 (+) 147 WP_003029519.1 bacteriocin -
  LK450_RS06900 (LK450_06900) comD/comD2 1404320..1405642 (+) 1323 WP_221739197.1 GHKL domain-containing protein Regulator
  LK450_RS06905 (LK450_06905) comE 1405642..1406391 (+) 750 WP_018543656.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29589.02 Da        Isoelectric Point: 8.6965

>NTDB_id=621419 LK450_RS06875 WP_003032028.1 1401186..1401953(-) (spo0J) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSEQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=621419 LK450_RS06875 WP_003032028.1 1401186..1401953(-) (spo0J) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGTTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTTCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTGCATTCCCAACAGACAAAAACTGTAACAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTGAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T0FRM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541