Detailed information NTG0056519

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: B649_RS09345
• Genome accession: NC_020505
• Coordinates: 1849139..1849381 (-)
• Length: 80 a.a.
• NCBI ID: WP_015654281.1
• Uniprot ID: -
• Organism: Candidatus Sulfuricurvum sp. RIFRC-1
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1844139..1854381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B649_RS09320 (B649_09225)	-	1845057..1845356 (-)	300	WP_041192713.1	ATP-dependent Clp protease adaptor ClpS	-
B649_RS09325 (B649_09230)	-	1845379..1846620 (-)	1242	WP_291750886.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	-
B649_RS09330 (B649_09235)	bioD	1846668..1847321 (+)	654	WP_015654278.1	dethiobiotin synthase	-
B649_RS09335 (B649_09240)	-	1847338..1848207 (+)	870	WP_015654279.1	aspartate carbamoyltransferase catalytic subunit	-
B649_RS09340 (B649_09245)	-	1848207..1849142 (+)	936	WP_015654280.1	aminodeoxychorismate synthase component I	-
B649_RS09345 (B649_09250)	comE	1849139..1849381 (-)	243	WP_015654281.1	helix-hairpin-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 80 a.a.
• Molecular weight: 8653.41 Da
• Isoelectric Point: 11.3779

>NTDB_id=56519 B649_RS09345 WP_015654281.1 1849139..1849381(-) (comE) [Candidatus Sulfuricurvum sp. RIFRC-1]
MVKILTILLLIFSLAMGSVNINKANSAQLQSLNGIGPTKAHEILKYRKAHGGFKSVNELVNVKGIGPKTLLKLKSQVSIR

Nucleotide

• Length: 243 bp

>NTDB_id=56519 B649_RS09345 WP_015654281.1 1849139..1849381(-) (comE) [Candidatus Sulfuricurvum sp. RIFRC-1]
ATGGTTAAAATACTCACAATTCTTTTGCTCATTTTTTCCCTTGCTATGGGTTCGGTCAATATCAACAAAGCTAATTCAGC
ACAGCTGCAATCTCTGAATGGCATCGGTCCGACCAAAGCACATGAAATTTTAAAATATCGTAAAGCTCATGGCGGATTTA
AAAGTGTAAATGAATTGGTAAATGTAAAAGGAATCGGACCTAAAACACTGCTCAAGCTAAAATCTCAAGTGAGTATTCGC
TAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Neisseria gonorrhoeae MS11	48.148	100	0.487
comE	Neisseria gonorrhoeae MS11	48.148	100	0.487
comE	Neisseria gonorrhoeae MS11	48.148	100	0.487
comE	Neisseria gonorrhoeae MS11	48.148	100	0.487
comEA	Vibrio parahaemolyticus RIMD 2210633	39.13	100	0.45
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	43.75	100	0.438
comEA	Lactococcus lactis subsp. cremoris KW2	52.459	76.25	0.4
comEA	Latilactobacillus sakei subsp. sakei 23K	50.82	76.25	0.388
comEA	Streptococcus thermophilus LMD-9	47.619	78.75	0.375
comEA/celA/cilE	Streptococcus mitis NCTC 12261	47.541	76.25	0.363
comEA/celA/cilE	Streptococcus pneumoniae Rx1	47.541	76.25	0.363
comEA/celA/cilE	Streptococcus pneumoniae D39	47.541	76.25	0.363
comEA/celA/cilE	Streptococcus pneumoniae R6	47.541	76.25	0.363
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	47.541	76.25	0.363
comEA	Acinetobacter baylyi ADP1	47.541	76.25	0.363
comEA	Acinetobacter baumannii D1279779	42.647	85	0.362