Detailed information
Bioinformatically predicted
Overview
| Name | comX/comX2 | Type | Regulator |
| Locus tag | L1A17_RS04020 | Genome accession | NZ_CP090886 |
| Coordinates | 794803..795282 (+) | Length | 159 a.a. |
| NCBI ID | WP_000588873.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain NP7513 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 789803..800282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1A17_RS03995 (L1A17_03995) | - | 790542..791417 (-) | 876 | WP_074017625.1 | RluA family pseudouridine synthase | - |
| L1A17_RS04000 (L1A17_04000) | pbp2a | 791504..793699 (+) | 2196 | WP_000762621.1 | penicillin-binding protein PBP2A | - |
| L1A17_RS04005 (L1A17_04005) | rpmG | 793752..793904 (+) | 153 | WP_001809375.1 | 50S ribosomal protein L33 | - |
| L1A17_RS04010 (L1A17_04010) | secE | 793914..794090 (+) | 177 | WP_001210991.1 | preprotein translocase subunit SecE | - |
| L1A17_RS04015 (L1A17_04015) | nusG | 794145..794681 (+) | 537 | WP_000376736.1 | transcription termination/antitermination protein NusG | - |
| L1A17_RS04020 (L1A17_04020) | comX/comX2 | 794803..795282 (+) | 480 | WP_000588873.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| L1A17_RS04025 (L1A17_04025) | - | 795310..796263 (-) | 954 | WP_001155321.1 | IS30-like element ISSpn8 family transposase | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 19845.50 Da Isoelectric Point: 7.3795
>NTDB_id=556855 L1A17_RS04020 WP_000588873.1 794803..795282(+) (comX/comX2) [Streptococcus pneumoniae strain NP7513]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRK
YDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRK
YDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH
Nucleotide
Download Length: 480 bp
>NTDB_id=556855 L1A17_RS04020 WP_000588873.1 794803..795282(+) (comX/comX2) [Streptococcus pneumoniae strain NP7513]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTTTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAAA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCACTAG
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTTTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAAA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCACTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.