Detailed information NTG0548980

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: J4Q32_RS09930
• Genome accession: NZ_CP071916
• Coordinates: 1911039..1911305 (-)
• Length: 88 a.a.
• NCBI ID: WP_000962026.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 19A-19087
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1906039..1916305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4Q32_RS09890 (J4Q32_09880)	rnpA	1906063..1906434 (-)	372	WP_000739246.1	ribonuclease P protein component	-
J4Q32_RS11355	-	1906451..1906582 (-)	132	WP_000768904.1	hypothetical protein	-
J4Q32_RS09895 (J4Q32_09885)	-	1906583..1907773 (-)	1191	WP_000167766.1	acetate kinase	-
J4Q32_RS09900 (J4Q32_09890)	comYH	1907824..1908777 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
J4Q32_RS09905 (J4Q32_09895)	-	1908838..1909425 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
J4Q32_RS09910 (J4Q32_09900)	comGG/cglG	1909562..1909975 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
J4Q32_RS09915 (J4Q32_09905)	comGF/cglF	1909953..1910414 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
J4Q32_RS09920 (J4Q32_09910)	comGE/cglE	1910377..1910679 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
J4Q32_RS09925 (J4Q32_09915)	comGD/cglD	1910642..1911046 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
J4Q32_RS09930 (J4Q32_09920)	comGC/cglC	1911039..1911305 (-)	267	WP_000962026.1	competence type IV pilus major pilin ComGC	Machinery gene
J4Q32_RS09935 (J4Q32_09925)	-	1911307..1911564 (-)	258	WP_000698513.1	hypothetical protein	-
J4Q32_RS09940 (J4Q32_09930)	-	1911796..1912752 (-)	957	WP_233923013.1	N-acetylmuramoyl-L-alanine amidase family protein	-
J4Q32_RS09945 (J4Q32_09935)	-	1912755..1913090 (-)	336	WP_050200954.1	phage holin	-
J4Q32_RS09950 (J4Q32_09940)	-	1913094..1913510 (-)	417	WP_001165344.1	phage holin family protein	-
J4Q32_RS09955 (J4Q32_09945)	-	1913520..1913870 (-)	351	WP_050200952.1	hypothetical protein	-
J4Q32_RS09960 (J4Q32_09950)	-	1913873..1914076 (-)	204	WP_001091109.1	hypothetical protein	-
J4Q32_RS11515	-	1914057..1914173 (-)	117	WP_001063633.1	hypothetical protein	-

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9818.31 Da
• Isoelectric Point: 7.0116

>NTDB_id=548980 J4Q32_RS09930 WP_000962026.1 1911039..1911305(-) (comGC/cglC) [Streptococcus pneumoniae strain 19A-19087]
MLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLQADGRITEEQAKAYKEYHDKNG
VANRKVND

Nucleotide

• Length: 267 bp

>NTDB_id=548980 J4Q32_RS09930 WP_000962026.1 1911039..1911305(-) (comGC/cglC) [Streptococcus pneumoniae strain 19A-19087]
ATGTTGGTGGTCTTGCTGATTATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCAGTCAA
TGACAAAGGAAAAGCAGCTGTTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTA
GCCTAAGCAAGTTACAAGCAGATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGA
GTAGCAAATCGTAAAGTCAATGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae Rx1	97.727	100	0.977
comGC/cglC	Streptococcus pneumoniae D39	97.727	100	0.977
comGC/cglC	Streptococcus pneumoniae R6	97.727	100	0.977
comGC/cglC	Streptococcus pneumoniae TIGR4	96.591	100	0.966
comGC/cglC	Streptococcus mitis SK321	93.243	84.091	0.784
comGC/cglC	Streptococcus mitis NCTC 12261	91.176	77.273	0.705
comYC	Streptococcus gordonii str. Challis substr. CH1	72.5	90.909	0.659
comYC	Streptococcus suis isolate S10	68.056	81.818	0.557
comYC	Streptococcus mutans UA140	61.429	79.545	0.489
comYC	Streptococcus mutans UA159	61.429	79.545	0.489
comGC	Lactococcus lactis subsp. cremoris KW2	50.667	85.227	0.432
comGC	Staphylococcus aureus MW2	47.826	78.409	0.375
comGC	Staphylococcus aureus N315	47.826	78.409	0.375