Detailed information NTG0543079

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: JZI57_RS10285
• Genome accession: NZ_CP071142
• Coordinates: 2129874..2130266 (-)
• Length: 130 a.a.
• NCBI ID: WP_012679302.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain 489_004
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2124874..2135266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI57_RS10250 (JZI57_10250)	-	2124899..2125393 (-)	495	WP_162009867.1	DNA cytosine methyltransferase	-
JZI57_RS10255 (JZI57_10255)	-	2125386..2126177 (-)	792	WP_050315852.1	DNA cytosine methyltransferase	-
JZI57_RS10260 (JZI57_10260)	-	2126179..2126868 (-)	690	WP_042356880.1	site-specific DNA-methyltransferase	-
JZI57_RS10265 (JZI57_10265)	-	2126879..2127106 (-)	228	WP_012679306.1	hypothetical protein	-
JZI57_RS10270 (JZI57_10270)	-	2127099..2127293 (-)	195	WP_012679305.1	hypothetical protein	-
JZI57_RS10275 (JZI57_10275)	-	2127649..2129049 (-)	1401	WP_012679304.1	virulence-associated E family protein	-
JZI57_RS10280 (JZI57_10280)	-	2129033..2129860 (-)	828	WP_012679303.1	bifunctional DNA primase/polymerase	-
JZI57_RS10285 (JZI57_10285)	ssbA	2129874..2130266 (-)	393	WP_012679302.1	single-stranded DNA-binding protein	Machinery gene
JZI57_RS10290 (JZI57_10290)	-	2130267..2130977 (-)	711	WP_012679301.1	ERF family protein	-
JZI57_RS10295 (JZI57_10295)	-	2130987..2132162 (-)	1176	WP_050315853.1	DEAD/DEAH box helicase family protein	-
JZI57_RS10300 (JZI57_10300)	-	2132122..2132595 (-)	474	WP_012679299.1	hypothetical protein	-
JZI57_RS10305 (JZI57_10305)	-	2132592..2133074 (-)	483	WP_012679298.1	siphovirus Gp157 family protein	-
JZI57_RS10310 (JZI57_10310)	-	2133074..2133415 (-)	342	WP_012679297.1	hypothetical protein	-
JZI57_RS10315 (JZI57_10315)	-	2133691..2133942 (-)	252	WP_012679294.1	hypothetical protein	-
JZI57_RS10320 (JZI57_10320)	-	2134015..2134227 (-)	213	WP_012679293.1	hypothetical protein	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14989.81 Da
• Isoelectric Point: 4.8660

>NTDB_id=543079 JZI57_RS10285 WP_012679302.1 2129874..2130266(-) (ssbA) [Streptococcus equi subsp. equi strain 489_004]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGVLIGITGRIQTR
NYENQQGQRVYVTEVVADNFKMLEYRQQQQQEDSFDNNNPMDIQADDLPF

Nucleotide

• Length: 393 bp

>NTDB_id=543079 JZI57_RS10285 WP_012679302.1 2129874..2130266(-) (ssbA) [Streptococcus equi subsp. equi strain 489_004]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAAGCGGATTTCATTAACTGTGTGATCT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCGAAAAAGGGTGTCTTGATTGGGATTACAGGACGTATTCAGACCCGT
AACTACGAAAACCAACAGGGGCAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCAAAATGCTGGAATACCGCCA
GCAACAGCAGCAAGAGGATTCATTCGATAATAACAATCCAATGGATATTCAGGCTGACGACTTGCCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.163	100	0.677
ssb	Latilactobacillus sakei subsp. sakei 23K	69.369	85.385	0.592
ssbB	Streptococcus sobrinus strain NIDR 6715-7	45.185	100	0.469
ssbB	Bacillus subtilis subsp. subtilis str. 168	53.982	86.923	0.469
ssbB/cilA	Streptococcus pneumoniae TIGR4	44.697	100	0.454
ssbB/cilA	Streptococcus pneumoniae Rx1	43.939	100	0.446
ssbB/cilA	Streptococcus mitis NCTC 12261	43.939	100	0.446
ssbB/cilA	Streptococcus pneumoniae D39	43.939	100	0.446
ssbB/cilA	Streptococcus pneumoniae R6	43.939	100	0.446
ssbB/cilA	Streptococcus mitis SK321	43.939	100	0.446
ssbA	Streptococcus mutans UA159	41.667	100	0.423
ssbB	Lactococcus lactis subsp. cremoris KW2	40.31	99.231	0.4